Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.64■□□□□ 0.74
Pcdh18Q8VHR0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh18Q8VHR0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh18Q8VHR0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdh18Q8VHR0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdh18Q8VHR0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh18Q8VHR0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh18Q8VHR0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh18Q8VHR0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Mir6538-201ENSMUST00000183713 110 ntBASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
Pcdh18Q8VHR0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh18Q8VHR0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh18Q8VHR0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh18Q8VHR0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh18Q8VHR0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdh18Q8VHR0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.61■□□□□ 0.73
Pcdh18Q8VHR0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh18Q8VHR0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdh18Q8VHR0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh18Q8VHR0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh18Q8VHR0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh18Q8VHR0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Gm12366-201ENSMUST00000121722 873 ntBASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Gm5786-201ENSMUST00000085368 882 ntBASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.58■□□□□ 0.72
Pcdh18Q8VHR0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.57■□□□□ 0.72
Pcdh18Q8VHR0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh18Q8VHR0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh18Q8VHR0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh18Q8VHR0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms