Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab40bQ8VHP8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab40bQ8VHP8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40bQ8VHP8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40bQ8VHP8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40bQ8VHP8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40bQ8VHP8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40bQ8VHP8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40bQ8VHP8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40bQ8VHP8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40bQ8VHP8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Rab40bQ8VHP8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab40bQ8VHP8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab40bQ8VHP8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab40bQ8VHP8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rab40bQ8VHP8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab40bQ8VHP8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab40bQ8VHP8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab40bQ8VHP8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40bQ8VHP8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab40bQ8VHP8 Golph3-202ENSMUST00000226517 2359 ntBASIC18.46■□□□□ 0.55
Rab40bQ8VHP8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab40bQ8VHP8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab40bQ8VHP8 Iqck-206ENSMUST00000208658 2891 ntBASIC18.46■□□□□ 0.55
Rab40bQ8VHP8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab40bQ8VHP8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rab40bQ8VHP8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40bQ8VHP8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40bQ8VHP8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40bQ8VHP8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rab40bQ8VHP8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40bQ8VHP8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40bQ8VHP8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.42■□□□□ 0.54
Rab40bQ8VHP8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40bQ8VHP8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40bQ8VHP8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40bQ8VHP8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40bQ8VHP8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40bQ8VHP8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.41■□□□□ 0.54
Rab40bQ8VHP8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40bQ8VHP8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40bQ8VHP8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40bQ8VHP8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40bQ8VHP8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40bQ8VHP8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.4■□□□□ 0.54
Rab40bQ8VHP8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40bQ8VHP8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40bQ8VHP8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40bQ8VHP8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rab40bQ8VHP8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rab40bQ8VHP8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab40bQ8VHP8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rab40bQ8VHP8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms