Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm21956-201ENSMUST00000179946 522 ntBASIC20.26■□□□□ 0.83
Retreg1dQ8VE91 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retreg1dQ8VE91 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg1dQ8VE91 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg1dQ8VE91 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg1dQ8VE91 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg1dQ8VE91 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg1dQ8VE91 Gm12922-201ENSMUST00000120626 809 ntBASIC20.23■□□□□ 0.83
Retreg1dQ8VE91 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.23■□□□□ 0.83
Retreg1dQ8VE91 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Retreg1dQ8VE91 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg1dQ8VE91 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg1dQ8VE91 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg1dQ8VE91 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retreg1dQ8VE91 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retreg1dQ8VE91 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg1dQ8VE91 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.2■□□□□ 0.82
Retreg1dQ8VE91 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg1dQ8VE91 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.19■□□□□ 0.82
Retreg1dQ8VE91 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg1dQ8VE91 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retreg1dQ8VE91 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg1dQ8VE91 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg1dQ8VE91 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retreg1dQ8VE91 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms