Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.37■□□□□ 0.69
Ndc1Q8VCB1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndc1Q8VCB1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndc1Q8VCB1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ndc1Q8VCB1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndc1Q8VCB1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.36■□□□□ 0.69
Ndc1Q8VCB1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.36■□□□□ 0.69
Ndc1Q8VCB1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndc1Q8VCB1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndc1Q8VCB1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ndc1Q8VCB1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndc1Q8VCB1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ndc1Q8VCB1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ndc1Q8VCB1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ndc1Q8VCB1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Ndc1Q8VCB1 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ndc1Q8VCB1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ndc1Q8VCB1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ndc1Q8VCB1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ndc1Q8VCB1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Ndc1Q8VCB1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ndc1Q8VCB1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ndc1Q8VCB1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ndc1Q8VCB1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ndc1Q8VCB1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.33■□□□□ 0.68
Ndc1Q8VCB1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Ndc1Q8VCB1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ndc1Q8VCB1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndc1Q8VCB1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ndc1Q8VCB1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Gm12821-201ENSMUST00000120022 600 ntBASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Gm9870-201ENSMUST00000063874 645 ntBASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndc1Q8VCB1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndc1Q8VCB1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc1Q8VCB1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.28■□□□□ 0.68
Ndc1Q8VCB1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ndc1Q8VCB1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc1Q8VCB1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc1Q8VCB1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.28■□□□□ 0.68
Ndc1Q8VCB1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc1Q8VCB1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndc1Q8VCB1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.27■□□□□ 0.68
Ndc1Q8VCB1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ndc1Q8VCB1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc1Q8VCB1 Gm27454-201ENSMUST00000185090 204 ntBASIC19.27■□□□□ 0.68
Ndc1Q8VCB1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Ndc1Q8VCB1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc1Q8VCB1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc1Q8VCB1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndc1Q8VCB1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ndc1Q8VCB1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ndc1Q8VCB1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ndc1Q8VCB1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.27■□□□□ 0.67
Ndc1Q8VCB1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms