Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Gm43566-201ENSMUST00000196851 808 ntBASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Vps39Q8R5L3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps39Q8R5L3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Vps39Q8R5L3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Vps39Q8R5L3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps39Q8R5L3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps39Q8R5L3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps39Q8R5L3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps39Q8R5L3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps39Q8R5L3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps39Q8R5L3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Vps39Q8R5L3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps39Q8R5L3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps39Q8R5L3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Vps39Q8R5L3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps39Q8R5L3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.52■□□□□ 0.88
Vps39Q8R5L3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps39Q8R5L3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps39Q8R5L3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.51■□□□□ 0.87
Vps39Q8R5L3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps39Q8R5L3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps39Q8R5L3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps39Q8R5L3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Gm13238-201ENSMUST00000117655 780 ntBASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps39Q8R5L3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vps39Q8R5L3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps39Q8R5L3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Vps39Q8R5L3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps39Q8R5L3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps39Q8R5L3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps39Q8R5L3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Vps39Q8R5L3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.49■□□□□ 0.87
Vps39Q8R5L3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps39Q8R5L3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps39Q8R5L3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps39Q8R5L3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps39Q8R5L3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps39Q8R5L3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.46■□□□□ 0.87
Vps39Q8R5L3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps39Q8R5L3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps39Q8R5L3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps39Q8R5L3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps39Q8R5L3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps39Q8R5L3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms