Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrna3Q8R4G9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chrna3Q8R4G9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chrna3Q8R4G9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Golgb1-201ENSMUST00000023534 498 ntBASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chrna3Q8R4G9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chrna3Q8R4G9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chrna3Q8R4G9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Chrna3Q8R4G9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chrna3Q8R4G9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chrna3Q8R4G9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
Chrna3Q8R4G9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrna3Q8R4G9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.11■□□□□ 0.81
Chrna3Q8R4G9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.1■□□□□ 0.81
Chrna3Q8R4G9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chrna3Q8R4G9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Chrna3Q8R4G9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chrna3Q8R4G9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chrna3Q8R4G9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chrna3Q8R4G9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.09■□□□□ 0.81
Chrna3Q8R4G9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chrna3Q8R4G9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chrna3Q8R4G9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chrna3Q8R4G9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chrna3Q8R4G9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chrna3Q8R4G9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chrna3Q8R4G9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chrna3Q8R4G9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chrna3Q8R4G9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chrna3Q8R4G9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Chrna3Q8R4G9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chrna3Q8R4G9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.08■□□□□ 0.8
Chrna3Q8R4G9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chrna3Q8R4G9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms