Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.04■□□□□ 0.96
Nup85Q8R480 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
Nup85Q8R480 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nup85Q8R480 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nup85Q8R480 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup85Q8R480 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Nup85Q8R480 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup85Q8R480 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup85Q8R480 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup85Q8R480 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup85Q8R480 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup85Q8R480 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.02■□□□□ 0.96
Nup85Q8R480 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup85Q8R480 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup85Q8R480 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nup85Q8R480 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nup85Q8R480 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup85Q8R480 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup85Q8R480 Gm22238-201ENSMUST00000175222 88 ntBASIC21.01■□□□□ 0.95
Nup85Q8R480 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup85Q8R480 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup85Q8R480 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup85Q8R480 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nup85Q8R480 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nup85Q8R480 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup85Q8R480 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nup85Q8R480 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup85Q8R480 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup85Q8R480 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup85Q8R480 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21■□□□□ 0.95
Nup85Q8R480 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21■□□□□ 0.95
Nup85Q8R480 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21■□□□□ 0.95
Nup85Q8R480 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nup85Q8R480 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup85Q8R480 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nup85Q8R480 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup85Q8R480 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup85Q8R480 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.99■□□□□ 0.95
Nup85Q8R480 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.99■□□□□ 0.95
Nup85Q8R480 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup85Q8R480 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nup85Q8R480 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup85Q8R480 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Nup85Q8R480 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup85Q8R480 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup85Q8R480 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup85Q8R480 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup85Q8R480 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nup85Q8R480 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Nup85Q8R480 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup85Q8R480 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup85Q8R480 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.95■□□□□ 0.94
Nup85Q8R480 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nup85Q8R480 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup85Q8R480 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup85Q8R480 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup85Q8R480 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup85Q8R480 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nup85Q8R480 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup85Q8R480 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.94■□□□□ 0.94
Nup85Q8R480 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.94■□□□□ 0.94
Nup85Q8R480 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup85Q8R480 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nup85Q8R480 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup85Q8R480 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup85Q8R480 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nup85Q8R480 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.93■□□□□ 0.94
Nup85Q8R480 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nup85Q8R480 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup85Q8R480 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.93■□□□□ 0.94
Nup85Q8R480 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup85Q8R480 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup85Q8R480 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup85Q8R480 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms