Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC26.48■■□□□ 1.83
Chmp7Q8R1T1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Chmp7Q8R1T1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Chmp7Q8R1T1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Chmp7Q8R1T1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Chmp7Q8R1T1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC26.47■■□□□ 1.83
Chmp7Q8R1T1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Chmp7Q8R1T1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC26.47■■□□□ 1.83
Chmp7Q8R1T1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Chmp7Q8R1T1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.47■■□□□ 1.83
Chmp7Q8R1T1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Chmp7Q8R1T1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Chmp7Q8R1T1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Chmp7Q8R1T1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
Chmp7Q8R1T1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Chmp7Q8R1T1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Chmp7Q8R1T1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC26.45■■□□□ 1.82
Chmp7Q8R1T1 Gm7160-202ENSMUST00000188519 1027 ntBASIC26.45■■□□□ 1.82
Chmp7Q8R1T1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Chmp7Q8R1T1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Chmp7Q8R1T1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Chmp7Q8R1T1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Chmp7Q8R1T1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Gm42418-201ENSMUST00000182010 1831 ntBASIC26.44■■□□□ 1.82
Chmp7Q8R1T1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Chmp7Q8R1T1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC26.43■■□□□ 1.82
Chmp7Q8R1T1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC26.43■■□□□ 1.82
Chmp7Q8R1T1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Chmp7Q8R1T1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Chmp7Q8R1T1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Chmp7Q8R1T1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Chmp7Q8R1T1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Chmp7Q8R1T1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Chmp7Q8R1T1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Chmp7Q8R1T1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Chmp7Q8R1T1 Gm6085-201ENSMUST00000182774 1470 ntBASIC26.42■■□□□ 1.82
Chmp7Q8R1T1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chmp7Q8R1T1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Chmp7Q8R1T1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chmp7Q8R1T1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chmp7Q8R1T1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chmp7Q8R1T1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Chmp7Q8R1T1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Chmp7Q8R1T1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Chmp7Q8R1T1 Spcs1-204ENSMUST00000226782 949 ntBASIC26.4■■□□□ 1.82
Chmp7Q8R1T1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Chmp7Q8R1T1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Chmp7Q8R1T1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Chmp7Q8R1T1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Chmp7Q8R1T1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Chmp7Q8R1T1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Chmp7Q8R1T1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Chmp7Q8R1T1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Chmp7Q8R1T1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chmp7Q8R1T1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Chmp7Q8R1T1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Chmp7Q8R1T1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chmp7Q8R1T1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC26.38■■□□□ 1.81
Chmp7Q8R1T1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chmp7Q8R1T1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chmp7Q8R1T1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chmp7Q8R1T1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chmp7Q8R1T1 Gm5874-201ENSMUST00000096101 508 ntBASIC26.37■■□□□ 1.81
Chmp7Q8R1T1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC26.37■■□□□ 1.81
Chmp7Q8R1T1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chmp7Q8R1T1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chmp7Q8R1T1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Chmp7Q8R1T1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC26.37■■□□□ 1.81
Chmp7Q8R1T1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC26.36■■□□□ 1.81
Chmp7Q8R1T1 Gm5297-201ENSMUST00000198555 1171 ntBASIC26.36■■□□□ 1.81
Chmp7Q8R1T1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC26.36■■□□□ 1.81
Chmp7Q8R1T1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Chmp7Q8R1T1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Chmp7Q8R1T1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
Chmp7Q8R1T1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Chmp7Q8R1T1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Chmp7Q8R1T1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC26.35■■□□□ 1.81
Chmp7Q8R1T1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Chmp7Q8R1T1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Chmp7Q8R1T1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms