Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Sf3a1Q8K4Z5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Sf3a1Q8K4Z5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sf3a1Q8K4Z5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sf3a1Q8K4Z5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.15■■□□□ 1.62
Sf3a1Q8K4Z5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sf3a1Q8K4Z5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sf3a1Q8K4Z5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sf3a1Q8K4Z5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Sf3a1Q8K4Z5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.14■■□□□ 1.62
Sf3a1Q8K4Z5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
Sf3a1Q8K4Z5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Sf3a1Q8K4Z5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Sf3a1Q8K4Z5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Sf3a1Q8K4Z5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sf3a1Q8K4Z5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sf3a1Q8K4Z5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.13■■□□□ 1.61
Sf3a1Q8K4Z5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 Gm12504-201ENSMUST00000120860 2231 ntBASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Sf3a1Q8K4Z5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sf3a1Q8K4Z5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Sf3a1Q8K4Z5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sf3a1Q8K4Z5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Sf3a1Q8K4Z5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sf3a1Q8K4Z5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sf3a1Q8K4Z5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
Sf3a1Q8K4Z5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Sf3a1Q8K4Z5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Sf3a1Q8K4Z5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.08■■□□□ 1.61
Sf3a1Q8K4Z5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sf3a1Q8K4Z5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sf3a1Q8K4Z5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sf3a1Q8K4Z5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Sf3a1Q8K4Z5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Sf3a1Q8K4Z5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sf3a1Q8K4Z5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC25.06■■□□□ 1.6
Sf3a1Q8K4Z5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sf3a1Q8K4Z5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.06■■□□□ 1.6
Sf3a1Q8K4Z5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.06■■□□□ 1.6
Sf3a1Q8K4Z5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sf3a1Q8K4Z5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Sf3a1Q8K4Z5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Sf3a1Q8K4Z5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sf3a1Q8K4Z5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sf3a1Q8K4Z5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
Sf3a1Q8K4Z5 Gm7143-201ENSMUST00000222811 859 ntBASIC25.05■■□□□ 1.6
Sf3a1Q8K4Z5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sf3a1Q8K4Z5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
Sf3a1Q8K4Z5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sf3a1Q8K4Z5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC25.04■■□□□ 1.6
Sf3a1Q8K4Z5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sf3a1Q8K4Z5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC25.04■■□□□ 1.6
Sf3a1Q8K4Z5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sf3a1Q8K4Z5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sf3a1Q8K4Z5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sf3a1Q8K4Z5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms