Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cchcr1Q8K2I2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Cchcr1Q8K2I2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cchcr1Q8K2I2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cchcr1Q8K2I2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cchcr1Q8K2I2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cchcr1Q8K2I2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Cchcr1Q8K2I2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cchcr1Q8K2I2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cchcr1Q8K2I2 Notumos-201ENSMUST00000151998 2659 ntBASIC24.31■■□□□ 1.48
Cchcr1Q8K2I2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Cchcr1Q8K2I2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.31■■□□□ 1.48
Cchcr1Q8K2I2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Cchcr1Q8K2I2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.31■■□□□ 1.48
Cchcr1Q8K2I2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cchcr1Q8K2I2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cchcr1Q8K2I2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Gm13238-201ENSMUST00000117655 780 ntBASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cchcr1Q8K2I2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cchcr1Q8K2I2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Cchcr1Q8K2I2 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.29■■□□□ 1.48
Cchcr1Q8K2I2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cchcr1Q8K2I2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cchcr1Q8K2I2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cchcr1Q8K2I2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cchcr1Q8K2I2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cchcr1Q8K2I2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Cchcr1Q8K2I2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cchcr1Q8K2I2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cchcr1Q8K2I2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.28■■□□□ 1.48
Cchcr1Q8K2I2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cchcr1Q8K2I2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cchcr1Q8K2I2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.28■■□□□ 1.48
Cchcr1Q8K2I2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cchcr1Q8K2I2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
Cchcr1Q8K2I2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cchcr1Q8K2I2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Cchcr1Q8K2I2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Cchcr1Q8K2I2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cchcr1Q8K2I2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cchcr1Q8K2I2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cchcr1Q8K2I2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Cchcr1Q8K2I2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cchcr1Q8K2I2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cchcr1Q8K2I2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cchcr1Q8K2I2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Gm10399-202ENSMUST00000202768 748 ntBASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Cchcr1Q8K2I2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cchcr1Q8K2I2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cchcr1Q8K2I2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cchcr1Q8K2I2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cchcr1Q8K2I2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Cchcr1Q8K2I2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Cchcr1Q8K2I2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cchcr1Q8K2I2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cchcr1Q8K2I2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms