Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd3Q8CIK8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd3Q8CIK8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd3Q8CIK8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd3Q8CIK8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rfwd3Q8CIK8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd3Q8CIK8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.26■□□□□ 0.67
Rfwd3Q8CIK8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd3Q8CIK8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd3Q8CIK8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfwd3Q8CIK8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.24■□□□□ 0.67
Rfwd3Q8CIK8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd3Q8CIK8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfwd3Q8CIK8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd3Q8CIK8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd3Q8CIK8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rfwd3Q8CIK8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd3Q8CIK8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd3Q8CIK8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.22■□□□□ 0.67
Rfwd3Q8CIK8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.22■□□□□ 0.67
Rfwd3Q8CIK8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd3Q8CIK8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd3Q8CIK8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Rfwd3Q8CIK8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd3Q8CIK8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd3Q8CIK8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfwd3Q8CIK8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd3Q8CIK8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfwd3Q8CIK8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd3Q8CIK8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd3Q8CIK8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd3Q8CIK8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd3Q8CIK8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Rfwd3Q8CIK8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd3Q8CIK8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd3Q8CIK8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd3Q8CIK8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd3Q8CIK8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd3Q8CIK8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd3Q8CIK8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.17■□□□□ 0.66
Rfwd3Q8CIK8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd3Q8CIK8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd3Q8CIK8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd3Q8CIK8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd3Q8CIK8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd3Q8CIK8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Gm22238-201ENSMUST00000175222 88 ntBASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd3Q8CIK8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd3Q8CIK8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms