Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Crlf2Q8CII9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Crlf2Q8CII9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Crlf2Q8CII9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
Crlf2Q8CII9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Crlf2Q8CII9 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.37■■□□□ 1.17
Crlf2Q8CII9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Crlf2Q8CII9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
Crlf2Q8CII9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Crlf2Q8CII9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Crlf2Q8CII9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.36■■□□□ 1.17
Crlf2Q8CII9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Crlf2Q8CII9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Crlf2Q8CII9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Crlf2Q8CII9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Crlf2Q8CII9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.35■■□□□ 1.17
Crlf2Q8CII9 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.35■■□□□ 1.17
Crlf2Q8CII9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Crlf2Q8CII9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Crlf2Q8CII9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Crlf2Q8CII9 Gm8520-201ENSMUST00000186517 868 ntBASIC22.34■■□□□ 1.17
Crlf2Q8CII9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.34■■□□□ 1.17
Crlf2Q8CII9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.34■■□□□ 1.17
Crlf2Q8CII9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.34■■□□□ 1.17
Crlf2Q8CII9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.34■■□□□ 1.17
Crlf2Q8CII9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Crlf2Q8CII9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Crlf2Q8CII9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.33■■□□□ 1.17
Crlf2Q8CII9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.33■■□□□ 1.17
Crlf2Q8CII9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.33■■□□□ 1.17
Crlf2Q8CII9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Crlf2Q8CII9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.33■■□□□ 1.16
Crlf2Q8CII9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.32■■□□□ 1.16
Crlf2Q8CII9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Crlf2Q8CII9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.32■■□□□ 1.16
Crlf2Q8CII9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Crlf2Q8CII9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Crlf2Q8CII9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Crlf2Q8CII9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Crlf2Q8CII9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Crlf2Q8CII9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Crlf2Q8CII9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Crlf2Q8CII9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Crlf2Q8CII9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Crlf2Q8CII9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.31■■□□□ 1.16
Crlf2Q8CII9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Crlf2Q8CII9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Crlf2Q8CII9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.3■■□□□ 1.16
Crlf2Q8CII9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Crlf2Q8CII9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Crlf2Q8CII9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Crlf2Q8CII9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Crlf2Q8CII9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Crlf2Q8CII9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Crlf2Q8CII9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Crlf2Q8CII9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Crlf2Q8CII9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.28■■□□□ 1.16
Crlf2Q8CII9 Gm9988-201ENSMUST00000069786 435 ntBASIC22.28■■□□□ 1.16
Crlf2Q8CII9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Crlf2Q8CII9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.28■■□□□ 1.16
Crlf2Q8CII9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Crlf2Q8CII9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.27■■□□□ 1.16
Crlf2Q8CII9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Crlf2Q8CII9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Crlf2Q8CII9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Crlf2Q8CII9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Crlf2Q8CII9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Crlf2Q8CII9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Crlf2Q8CII9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.26■■□□□ 1.15
Crlf2Q8CII9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crlf2Q8CII9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crlf2Q8CII9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Crlf2Q8CII9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crlf2Q8CII9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Crlf2Q8CII9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Crlf2Q8CII9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Crlf2Q8CII9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Crlf2Q8CII9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Crlf2Q8CII9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Crlf2Q8CII9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
Crlf2Q8CII9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.24■■□□□ 1.15
Crlf2Q8CII9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Crlf2Q8CII9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Crlf2Q8CII9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Crlf2Q8CII9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Crlf2Q8CII9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Crlf2Q8CII9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Crlf2Q8CII9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.23■■□□□ 1.15
Crlf2Q8CII9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
Crlf2Q8CII9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Gm4968-201ENSMUST00000071458 858 ntBASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crlf2Q8CII9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms