Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rftn2Q8CHX7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rftn2Q8CHX7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rftn2Q8CHX7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Rftn2Q8CHX7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Rftn2Q8CHX7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rftn2Q8CHX7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rftn2Q8CHX7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rftn2Q8CHX7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rftn2Q8CHX7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rftn2Q8CHX7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.97■■□□□ 1.11
Rftn2Q8CHX7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.97■■□□□ 1.11
Rftn2Q8CHX7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rftn2Q8CHX7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rftn2Q8CHX7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rftn2Q8CHX7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Rftn2Q8CHX7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rftn2Q8CHX7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.96■■□□□ 1.11
Rftn2Q8CHX7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
Rftn2Q8CHX7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rftn2Q8CHX7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Rftn2Q8CHX7 Gm45417-201ENSMUST00000209533 758 ntBASIC21.95■■□□□ 1.1
Rftn2Q8CHX7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rftn2Q8CHX7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rftn2Q8CHX7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.94■■□□□ 1.1
Rftn2Q8CHX7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rftn2Q8CHX7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Rftn2Q8CHX7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rftn2Q8CHX7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.93■■□□□ 1.1
Rftn2Q8CHX7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.93■■□□□ 1.1
Rftn2Q8CHX7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.93■■□□□ 1.1
Rftn2Q8CHX7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rftn2Q8CHX7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Rftn2Q8CHX7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rftn2Q8CHX7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Rftn2Q8CHX7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rftn2Q8CHX7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rftn2Q8CHX7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.92■■□□□ 1.1
Rftn2Q8CHX7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rftn2Q8CHX7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rftn2Q8CHX7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rftn2Q8CHX7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rftn2Q8CHX7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rftn2Q8CHX7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rftn2Q8CHX7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rftn2Q8CHX7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rftn2Q8CHX7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rftn2Q8CHX7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rftn2Q8CHX7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.9■■□□□ 1.1
Rftn2Q8CHX7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rftn2Q8CHX7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Rftn2Q8CHX7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rftn2Q8CHX7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rftn2Q8CHX7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rftn2Q8CHX7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rftn2Q8CHX7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rftn2Q8CHX7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rftn2Q8CHX7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rftn2Q8CHX7 Gm43137-201ENSMUST00000198052 594 ntBASIC21.88■■□□□ 1.09
Rftn2Q8CHX7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rftn2Q8CHX7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rftn2Q8CHX7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rftn2Q8CHX7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rftn2Q8CHX7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.87■■□□□ 1.09
Rftn2Q8CHX7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rftn2Q8CHX7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rftn2Q8CHX7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rftn2Q8CHX7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rftn2Q8CHX7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rftn2Q8CHX7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rftn2Q8CHX7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms