Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rdh1Q8CGV4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rdh1Q8CGV4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rdh1Q8CGV4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rdh1Q8CGV4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rdh1Q8CGV4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rdh1Q8CGV4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.04■□□□□ 0.8
Rdh1Q8CGV4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.04■□□□□ 0.8
Rdh1Q8CGV4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rdh1Q8CGV4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rdh1Q8CGV4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rdh1Q8CGV4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rdh1Q8CGV4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rdh1Q8CGV4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rdh1Q8CGV4 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.03■□□□□ 0.8
Rdh1Q8CGV4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rdh1Q8CGV4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rdh1Q8CGV4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rdh1Q8CGV4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rdh1Q8CGV4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.02■□□□□ 0.8
Rdh1Q8CGV4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Rdh1Q8CGV4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rdh1Q8CGV4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rdh1Q8CGV4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rdh1Q8CGV4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.02■□□□□ 0.8
Rdh1Q8CGV4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.02■□□□□ 0.8
Rdh1Q8CGV4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.01■□□□□ 0.79
Rdh1Q8CGV4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rdh1Q8CGV4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rdh1Q8CGV4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rdh1Q8CGV4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.01■□□□□ 0.79
Rdh1Q8CGV4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rdh1Q8CGV4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rdh1Q8CGV4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
Rdh1Q8CGV4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rdh1Q8CGV4 Gm44949-201ENSMUST00000206423 1450 ntBASIC20■□□□□ 0.79
Rdh1Q8CGV4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rdh1Q8CGV4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rdh1Q8CGV4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rdh1Q8CGV4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rdh1Q8CGV4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rdh1Q8CGV4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rdh1Q8CGV4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rdh1Q8CGV4 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.99■□□□□ 0.79
Rdh1Q8CGV4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rdh1Q8CGV4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rdh1Q8CGV4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rdh1Q8CGV4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rdh1Q8CGV4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rdh1Q8CGV4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Gm43530-201ENSMUST00000195920 274 ntBASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rdh1Q8CGV4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Gm43137-201ENSMUST00000198052 594 ntBASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rdh1Q8CGV4 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.96■□□□□ 0.79
Rdh1Q8CGV4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rdh1Q8CGV4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rdh1Q8CGV4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rdh1Q8CGV4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Rdh1Q8CGV4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Rdh1Q8CGV4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rdh1Q8CGV4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rdh1Q8CGV4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.95■□□□□ 0.78
Rdh1Q8CGV4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.95■□□□□ 0.78
Rdh1Q8CGV4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rdh1Q8CGV4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Rdh1Q8CGV4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms