Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Calcoco1Q8CGU1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Calcoco1Q8CGU1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Calcoco1Q8CGU1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.19■□□□□ 0.98
Calcoco1Q8CGU1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Calcoco1Q8CGU1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Calcoco1Q8CGU1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Calcoco1Q8CGU1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Calcoco1Q8CGU1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Calcoco1Q8CGU1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Calcoco1Q8CGU1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Calcoco1Q8CGU1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Calcoco1Q8CGU1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Calcoco1Q8CGU1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Calcoco1Q8CGU1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Calcoco1Q8CGU1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Calcoco1Q8CGU1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Calcoco1Q8CGU1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Calcoco1Q8CGU1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Calcoco1Q8CGU1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Calcoco1Q8CGU1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Calcoco1Q8CGU1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Calcoco1Q8CGU1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.13■□□□□ 0.97
Calcoco1Q8CGU1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Calcoco1Q8CGU1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Calcoco1Q8CGU1 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.13■□□□□ 0.97
Calcoco1Q8CGU1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Calcoco1Q8CGU1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Calcoco1Q8CGU1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Calcoco1Q8CGU1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Calcoco1Q8CGU1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Calcoco1Q8CGU1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Calcoco1Q8CGU1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Calcoco1Q8CGU1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Calcoco1Q8CGU1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.11■□□□□ 0.97
Calcoco1Q8CGU1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Calcoco1Q8CGU1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Calcoco1Q8CGU1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Calcoco1Q8CGU1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Calcoco1Q8CGU1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.11■□□□□ 0.97
Calcoco1Q8CGU1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Calcoco1Q8CGU1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Calcoco1Q8CGU1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms