Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Rp1l1Q8CGM2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rp1l1Q8CGM2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.91■■□□□ 1.1
Rp1l1Q8CGM2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rp1l1Q8CGM2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rp1l1Q8CGM2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rp1l1Q8CGM2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rp1l1Q8CGM2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rp1l1Q8CGM2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.89■■□□□ 1.1
Rp1l1Q8CGM2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Rp1l1Q8CGM2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rp1l1Q8CGM2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.89■■□□□ 1.09
Rp1l1Q8CGM2 Gm18671-201ENSMUST00000214826 683 ntBASIC21.89■■□□□ 1.09
Rp1l1Q8CGM2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Rp1l1Q8CGM2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rp1l1Q8CGM2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rp1l1Q8CGM2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rp1l1Q8CGM2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rp1l1Q8CGM2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Rp1l1Q8CGM2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rp1l1Q8CGM2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.88■■□□□ 1.09
Rp1l1Q8CGM2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rp1l1Q8CGM2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rp1l1Q8CGM2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.87■■□□□ 1.09
Rp1l1Q8CGM2 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.86■■□□□ 1.09
Rp1l1Q8CGM2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rp1l1Q8CGM2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.86■■□□□ 1.09
Rp1l1Q8CGM2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.86■■□□□ 1.09
Rp1l1Q8CGM2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.86■■□□□ 1.09
Rp1l1Q8CGM2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rp1l1Q8CGM2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rp1l1Q8CGM2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rp1l1Q8CGM2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rp1l1Q8CGM2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rp1l1Q8CGM2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Rp1l1Q8CGM2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rp1l1Q8CGM2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Rp1l1Q8CGM2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.84■■□□□ 1.09
Rp1l1Q8CGM2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rp1l1Q8CGM2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rp1l1Q8CGM2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rp1l1Q8CGM2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rp1l1Q8CGM2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Rp1l1Q8CGM2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rp1l1Q8CGM2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rp1l1Q8CGM2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Rp1l1Q8CGM2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Rp1l1Q8CGM2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.83■■□□□ 1.08
Rp1l1Q8CGM2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rp1l1Q8CGM2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rp1l1Q8CGM2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rp1l1Q8CGM2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Rp1l1Q8CGM2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rp1l1Q8CGM2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rp1l1Q8CGM2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Rp1l1Q8CGM2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rp1l1Q8CGM2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rp1l1Q8CGM2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rp1l1Q8CGM2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
Rp1l1Q8CGM2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Rp1l1Q8CGM2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rp1l1Q8CGM2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rp1l1Q8CGM2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rp1l1Q8CGM2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms