Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Pabpn1Q8CCS6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
Pabpn1Q8CCS6 Gm3807-201ENSMUST00000193520 1168 ntBASIC32.97■■■□□ 2.87
Pabpn1Q8CCS6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Pabpn1Q8CCS6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Pabpn1Q8CCS6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Pabpn1Q8CCS6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
Pabpn1Q8CCS6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC32.96■■■□□ 2.87
Pabpn1Q8CCS6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Pabpn1Q8CCS6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
Pabpn1Q8CCS6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC32.95■■■□□ 2.87
Pabpn1Q8CCS6 Gm9988-201ENSMUST00000069786 435 ntBASIC32.95■■■□□ 2.87
Pabpn1Q8CCS6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pabpn1Q8CCS6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC32.94■■■□□ 2.86
Pabpn1Q8CCS6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC32.94■■■□□ 2.86
Pabpn1Q8CCS6 Gm10812-201ENSMUST00000099864 546 ntBASIC32.94■■■□□ 2.86
Pabpn1Q8CCS6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC32.94■■■□□ 2.86
Pabpn1Q8CCS6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
Pabpn1Q8CCS6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
Pabpn1Q8CCS6 Gm29241-201ENSMUST00000189260 1096 ntBASIC32.93■■■□□ 2.86
Pabpn1Q8CCS6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Pabpn1Q8CCS6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
Pabpn1Q8CCS6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC32.92■■■□□ 2.86
Pabpn1Q8CCS6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Pabpn1Q8CCS6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Pabpn1Q8CCS6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Pabpn1Q8CCS6 Gm13234-201ENSMUST00000120010 747 ntBASIC32.91■■■□□ 2.86
Pabpn1Q8CCS6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC32.91■■■□□ 2.86
Pabpn1Q8CCS6 Gm43530-201ENSMUST00000195920 274 ntBASIC32.91■■■□□ 2.86
Pabpn1Q8CCS6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Pabpn1Q8CCS6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Pabpn1Q8CCS6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Pabpn1Q8CCS6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC32.89■■■□□ 2.86
Pabpn1Q8CCS6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Pabpn1Q8CCS6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC32.88■■■□□ 2.85
Pabpn1Q8CCS6 Gm11421-201ENSMUST00000122124 294 ntBASIC32.87■■■□□ 2.85
Pabpn1Q8CCS6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
Pabpn1Q8CCS6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
Pabpn1Q8CCS6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC32.87■■■□□ 2.85
Pabpn1Q8CCS6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Pabpn1Q8CCS6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Pabpn1Q8CCS6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
Pabpn1Q8CCS6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Pabpn1Q8CCS6 Gm42555-201ENSMUST00000199304 1039 ntBASIC32.86■■■□□ 2.85
Pabpn1Q8CCS6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC32.86■■■□□ 2.85
Pabpn1Q8CCS6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC32.86■■■□□ 2.85
Pabpn1Q8CCS6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Pabpn1Q8CCS6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Pabpn1Q8CCS6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pabpn1Q8CCS6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
Pabpn1Q8CCS6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Pabpn1Q8CCS6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pabpn1Q8CCS6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
Pabpn1Q8CCS6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC32.84■■■□□ 2.85
Pabpn1Q8CCS6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC32.84■■■□□ 2.85
Pabpn1Q8CCS6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Pabpn1Q8CCS6 Gm7514-201ENSMUST00000209475 934 ntBASIC32.83■■■□□ 2.85
Pabpn1Q8CCS6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Pabpn1Q8CCS6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.85
Pabpn1Q8CCS6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Pabpn1Q8CCS6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Pabpn1Q8CCS6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Pabpn1Q8CCS6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Pabpn1Q8CCS6 Gm29994-201ENSMUST00000195495 1193 ntBASIC32.81■■■□□ 2.84
Pabpn1Q8CCS6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Pabpn1Q8CCS6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Pabpn1Q8CCS6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Pabpn1Q8CCS6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Pabpn1Q8CCS6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
Pabpn1Q8CCS6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Pabpn1Q8CCS6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Pabpn1Q8CCS6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
Pabpn1Q8CCS6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Pabpn1Q8CCS6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
Pabpn1Q8CCS6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Pabpn1Q8CCS6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Pabpn1Q8CCS6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC32.79■■■□□ 2.84
Pabpn1Q8CCS6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Pabpn1Q8CCS6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Pabpn1Q8CCS6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC32.78■■■□□ 2.84
Pabpn1Q8CCS6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pabpn1Q8CCS6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC32.78■■■□□ 2.84
Pabpn1Q8CCS6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Pabpn1Q8CCS6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Pabpn1Q8CCS6 Gm13181-201ENSMUST00000120117 1069 ntBASIC32.77■■■□□ 2.84
Pabpn1Q8CCS6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC32.77■■■□□ 2.84
Pabpn1Q8CCS6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pabpn1Q8CCS6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pabpn1Q8CCS6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pabpn1Q8CCS6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.83
Pabpn1Q8CCS6 Ap3s1-204ENSMUST00000225520 957 ntBASIC32.76■■■□□ 2.83
Pabpn1Q8CCS6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Pabpn1Q8CCS6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
Pabpn1Q8CCS6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Pabpn1Q8CCS6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
Pabpn1Q8CCS6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Pabpn1Q8CCS6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Pabpn1Q8CCS6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
Pabpn1Q8CCS6 Amer2-203ENSMUST00000225247 2662 ntBASIC32.74■■■□□ 2.83
Pabpn1Q8CCS6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC32.74■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms