Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rft1Q8C3B8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rft1Q8C3B8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rft1Q8C3B8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rft1Q8C3B8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rft1Q8C3B8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rft1Q8C3B8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rft1Q8C3B8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rft1Q8C3B8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rft1Q8C3B8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rft1Q8C3B8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rft1Q8C3B8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rft1Q8C3B8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Rft1Q8C3B8 Iqck-206ENSMUST00000208658 2891 ntBASIC18.16■□□□□ 0.5
Rft1Q8C3B8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rft1Q8C3B8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rft1Q8C3B8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rft1Q8C3B8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rft1Q8C3B8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Gm13238-201ENSMUST00000117655 780 ntBASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Gm43566-201ENSMUST00000196851 808 ntBASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.15■□□□□ 0.5
Rft1Q8C3B8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rft1Q8C3B8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rft1Q8C3B8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rft1Q8C3B8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rft1Q8C3B8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rft1Q8C3B8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rft1Q8C3B8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rft1Q8C3B8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rft1Q8C3B8 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rft1Q8C3B8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Gm5812-201ENSMUST00000061073 957 ntBASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rft1Q8C3B8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rft1Q8C3B8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rft1Q8C3B8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rft1Q8C3B8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rft1Q8C3B8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rft1Q8C3B8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms