Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrtm1Q8BXQ3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrtm1Q8BXQ3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.97■□□□□ 0.47
Lrtm1Q8BXQ3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lrtm1Q8BXQ3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrtm1Q8BXQ3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrtm1Q8BXQ3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrtm1Q8BXQ3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrtm1Q8BXQ3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lrtm1Q8BXQ3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Lrtm1Q8BXQ3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Lrtm1Q8BXQ3 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.94■□□□□ 0.46
Lrtm1Q8BXQ3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrtm1Q8BXQ3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrtm1Q8BXQ3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrtm1Q8BXQ3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrtm1Q8BXQ3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrtm1Q8BXQ3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrtm1Q8BXQ3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Lrtm1Q8BXQ3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrtm1Q8BXQ3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lrtm1Q8BXQ3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrtm1Q8BXQ3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lrtm1Q8BXQ3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrtm1Q8BXQ3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lrtm1Q8BXQ3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.91■□□□□ 0.46
Lrtm1Q8BXQ3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Lrtm1Q8BXQ3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lrtm1Q8BXQ3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lrtm1Q8BXQ3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.9■□□□□ 0.46
Lrtm1Q8BXQ3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lrtm1Q8BXQ3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.9■□□□□ 0.46
Lrtm1Q8BXQ3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lrtm1Q8BXQ3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrtm1Q8BXQ3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrtm1Q8BXQ3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.89■□□□□ 0.45
Lrtm1Q8BXQ3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lrtm1Q8BXQ3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lrtm1Q8BXQ3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrtm1Q8BXQ3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrtm1Q8BXQ3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Lrtm1Q8BXQ3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.88■□□□□ 0.45
Lrtm1Q8BXQ3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lrtm1Q8BXQ3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrtm1Q8BXQ3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lrtm1Q8BXQ3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
Lrtm1Q8BXQ3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrtm1Q8BXQ3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.87■□□□□ 0.45
Lrtm1Q8BXQ3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrtm1Q8BXQ3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrtm1Q8BXQ3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrtm1Q8BXQ3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrtm1Q8BXQ3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrtm1Q8BXQ3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms