Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm11Q8BUV6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.46■□□□□ 0.39
Lsm11Q8BUV6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm11Q8BUV6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.46■□□□□ 0.39
Lsm11Q8BUV6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm11Q8BUV6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm11Q8BUV6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm11Q8BUV6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.46■□□□□ 0.39
Lsm11Q8BUV6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lsm11Q8BUV6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm11Q8BUV6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm11Q8BUV6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Gm27502-201ENSMUST00000183495 199 ntBASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm11Q8BUV6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.42■□□□□ 0.38
Lsm11Q8BUV6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lsm11Q8BUV6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm11Q8BUV6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.42■□□□□ 0.38
Lsm11Q8BUV6 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.42■□□□□ 0.38
Lsm11Q8BUV6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm11Q8BUV6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm11Q8BUV6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm11Q8BUV6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm11Q8BUV6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lsm11Q8BUV6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lsm11Q8BUV6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Lsm11Q8BUV6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lsm11Q8BUV6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm11Q8BUV6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm11Q8BUV6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm11Q8BUV6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm11Q8BUV6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm11Q8BUV6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm11Q8BUV6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.39■□□□□ 0.37
Lsm11Q8BUV6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm11Q8BUV6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm11Q8BUV6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms