Protein–RNA interactions for Protein: Q8BTU7

Rccd1, RCC1 domain-containing protein 1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rccd1Q8BTU7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rccd1Q8BTU7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rccd1Q8BTU7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rccd1Q8BTU7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rccd1Q8BTU7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rccd1Q8BTU7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rccd1Q8BTU7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rccd1Q8BTU7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
Rccd1Q8BTU7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rccd1Q8BTU7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rccd1Q8BTU7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rccd1Q8BTU7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rccd1Q8BTU7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rccd1Q8BTU7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rccd1Q8BTU7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.87■□□□□ 0.93
Rccd1Q8BTU7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rccd1Q8BTU7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rccd1Q8BTU7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rccd1Q8BTU7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rccd1Q8BTU7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Rccd1Q8BTU7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rccd1Q8BTU7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rccd1Q8BTU7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Gm6311-201ENSMUST00000073790 878 ntBASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rccd1Q8BTU7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rccd1Q8BTU7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rccd1Q8BTU7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Rccd1Q8BTU7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rccd1Q8BTU7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rccd1Q8BTU7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rccd1Q8BTU7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rccd1Q8BTU7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rccd1Q8BTU7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Gm44487-201ENSMUST00000205145 325 ntBASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rccd1Q8BTU7 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Scarna2-201ENSMUST00000157560 414 ntBASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Gm16437-201ENSMUST00000025669 507 ntBASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rccd1Q8BTU7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rccd1Q8BTU7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rccd1Q8BTU7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rccd1Q8BTU7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rccd1Q8BTU7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Gm9806-201ENSMUST00000051080 552 ntBASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rccd1Q8BTU7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rccd1Q8BTU7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rccd1Q8BTU7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms