Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.3■□□□□ 0.68
Ppp1r3eQ8BRJ4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ppp1r3eQ8BRJ4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.3■□□□□ 0.68
Ppp1r3eQ8BRJ4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ppp1r3eQ8BRJ4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ppp1r3eQ8BRJ4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ppp1r3eQ8BRJ4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.28■□□□□ 0.68
Ppp1r3eQ8BRJ4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp1r3eQ8BRJ4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp1r3eQ8BRJ4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp1r3eQ8BRJ4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp1r3eQ8BRJ4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp1r3eQ8BRJ4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.27■□□□□ 0.68
Ppp1r3eQ8BRJ4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.27■□□□□ 0.68
Ppp1r3eQ8BRJ4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.27■□□□□ 0.68
Ppp1r3eQ8BRJ4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ppp1r3eQ8BRJ4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r3eQ8BRJ4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r3eQ8BRJ4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r3eQ8BRJ4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r3eQ8BRJ4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r3eQ8BRJ4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r3eQ8BRJ4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r3eQ8BRJ4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.25■□□□□ 0.67
Ppp1r3eQ8BRJ4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ppp1r3eQ8BRJ4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
Ppp1r3eQ8BRJ4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ppp1r3eQ8BRJ4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp1r3eQ8BRJ4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp1r3eQ8BRJ4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ppp1r3eQ8BRJ4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.23■□□□□ 0.67
Ppp1r3eQ8BRJ4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.22■□□□□ 0.67
Ppp1r3eQ8BRJ4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ppp1r3eQ8BRJ4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp1r3eQ8BRJ4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r3eQ8BRJ4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ppp1r3eQ8BRJ4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp1r3eQ8BRJ4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp1r3eQ8BRJ4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp1r3eQ8BRJ4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp1r3eQ8BRJ4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.19■□□□□ 0.66
Ppp1r3eQ8BRJ4 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.19■□□□□ 0.66
Ppp1r3eQ8BRJ4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp1r3eQ8BRJ4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp1r3eQ8BRJ4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp1r3eQ8BRJ4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms