Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap4Q8BMK4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap4Q8BMK4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap4Q8BMK4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap4Q8BMK4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ckap4Q8BMK4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap4Q8BMK4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.33■□□□□ 0.68
Ckap4Q8BMK4 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.33■□□□□ 0.68
Ckap4Q8BMK4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap4Q8BMK4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap4Q8BMK4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap4Q8BMK4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap4Q8BMK4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap4Q8BMK4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Gm5921-201ENSMUST00000075898 882 ntBASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap4Q8BMK4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Gm45444-201ENSMUST00000211394 898 ntBASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap4Q8BMK4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap4Q8BMK4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap4Q8BMK4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap4Q8BMK4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap4Q8BMK4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap4Q8BMK4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap4Q8BMK4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Ckap4Q8BMK4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap4Q8BMK4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap4Q8BMK4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ckap4Q8BMK4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap4Q8BMK4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ckap4Q8BMK4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap4Q8BMK4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ckap4Q8BMK4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap4Q8BMK4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ckap4Q8BMK4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap4Q8BMK4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ckap4Q8BMK4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap4Q8BMK4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap4Q8BMK4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.25■□□□□ 0.67
Ckap4Q8BMK4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.25■□□□□ 0.67
Ckap4Q8BMK4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap4Q8BMK4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap4Q8BMK4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ckap4Q8BMK4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap4Q8BMK4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms