Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpne4Q8BLR2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne4Q8BLR2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne4Q8BLR2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne4Q8BLR2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne4Q8BLR2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne4Q8BLR2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.37■□□□□ 0.53
Cpne4Q8BLR2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cpne4Q8BLR2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne4Q8BLR2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Cpne4Q8BLR2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpne4Q8BLR2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpne4Q8BLR2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne4Q8BLR2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne4Q8BLR2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne4Q8BLR2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne4Q8BLR2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne4Q8BLR2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne4Q8BLR2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne4Q8BLR2 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.34■□□□□ 0.53
Cpne4Q8BLR2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cpne4Q8BLR2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne4Q8BLR2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpne4Q8BLR2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.33■□□□□ 0.53
Cpne4Q8BLR2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cpne4Q8BLR2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.33■□□□□ 0.52
Cpne4Q8BLR2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cpne4Q8BLR2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cpne4Q8BLR2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne4Q8BLR2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cpne4Q8BLR2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne4Q8BLR2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne4Q8BLR2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne4Q8BLR2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne4Q8BLR2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.32■□□□□ 0.52
Cpne4Q8BLR2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Cpne4Q8BLR2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.32■□□□□ 0.52
Cpne4Q8BLR2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne4Q8BLR2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpne4Q8BLR2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Gm9870-201ENSMUST00000063874 645 ntBASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cpne4Q8BLR2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Gm7143-201ENSMUST00000222811 859 ntBASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cpne4Q8BLR2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Cpne4Q8BLR2 Gm12922-201ENSMUST00000120626 809 ntBASIC18.29■□□□□ 0.52
Cpne4Q8BLR2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.29■□□□□ 0.52
Cpne4Q8BLR2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne4Q8BLR2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Cpne4Q8BLR2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne4Q8BLR2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne4Q8BLR2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpne4Q8BLR2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cpne4Q8BLR2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne4Q8BLR2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpne4Q8BLR2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.27■□□□□ 0.52
Cpne4Q8BLR2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpne4Q8BLR2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpne4Q8BLR2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.27■□□□□ 0.51
Cpne4Q8BLR2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpne4Q8BLR2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne4Q8BLR2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.26■□□□□ 0.51
Cpne4Q8BLR2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms