Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smg1Q8BKX6 Gm10602-201ENSMUST00000098239 609 ntBASIC17.75■□□□□ 0.43
Smg1Q8BKX6 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.75■□□□□ 0.43
Smg1Q8BKX6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.75■□□□□ 0.43
Smg1Q8BKX6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smg1Q8BKX6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Smg1Q8BKX6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smg1Q8BKX6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smg1Q8BKX6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smg1Q8BKX6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smg1Q8BKX6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smg1Q8BKX6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smg1Q8BKX6 Mir7071-201ENSMUST00000184847 69 ntBASIC17.73■□□□□ 0.43
Smg1Q8BKX6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smg1Q8BKX6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smg1Q8BKX6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smg1Q8BKX6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smg1Q8BKX6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smg1Q8BKX6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smg1Q8BKX6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smg1Q8BKX6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.72■□□□□ 0.43
Smg1Q8BKX6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smg1Q8BKX6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.72■□□□□ 0.43
Smg1Q8BKX6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smg1Q8BKX6 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.71■□□□□ 0.43
Smg1Q8BKX6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.71■□□□□ 0.43
Smg1Q8BKX6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smg1Q8BKX6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smg1Q8BKX6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.71■□□□□ 0.43
Smg1Q8BKX6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smg1Q8BKX6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smg1Q8BKX6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smg1Q8BKX6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Gm10653-202ENSMUST00000139570 835 ntBASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Gm7977-201ENSMUST00000193787 748 ntBASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Gm18671-201ENSMUST00000214826 683 ntBASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smg1Q8BKX6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smg1Q8BKX6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.68■□□□□ 0.42
Smg1Q8BKX6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smg1Q8BKX6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.68■□□□□ 0.42
Smg1Q8BKX6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smg1Q8BKX6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.68■□□□□ 0.42
Smg1Q8BKX6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.67■□□□□ 0.42
Smg1Q8BKX6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smg1Q8BKX6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smg1Q8BKX6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smg1Q8BKX6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smg1Q8BKX6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smg1Q8BKX6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smg1Q8BKX6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smg1Q8BKX6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smg1Q8BKX6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms