Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2bQ8BJF9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2bQ8BJF9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2bQ8BJF9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.95■□□□□ 0.94
Chmp2bQ8BJF9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Chmp2bQ8BJF9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Chmp2bQ8BJF9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.95■□□□□ 0.94
Chmp2bQ8BJF9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2bQ8BJF9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Chmp2bQ8BJF9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2bQ8BJF9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2bQ8BJF9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp2bQ8BJF9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp2bQ8BJF9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp2bQ8BJF9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp2bQ8BJF9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp2bQ8BJF9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Chmp2bQ8BJF9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2bQ8BJF9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2bQ8BJF9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2bQ8BJF9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.89■□□□□ 0.93
Chmp2bQ8BJF9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2bQ8BJF9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chmp2bQ8BJF9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.89■□□□□ 0.93
Chmp2bQ8BJF9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2bQ8BJF9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2bQ8BJF9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2bQ8BJF9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2bQ8BJF9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2bQ8BJF9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2bQ8BJF9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2bQ8BJF9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2bQ8BJF9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2bQ8BJF9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms