Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tdp1Q8BJ37 Gm6085-201ENSMUST00000182774 1470 ntBASIC22.88■■□□□ 1.25
Tdp1Q8BJ37 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tdp1Q8BJ37 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tdp1Q8BJ37 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tdp1Q8BJ37 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tdp1Q8BJ37 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Tdp1Q8BJ37 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tdp1Q8BJ37 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.87■■□□□ 1.25
Tdp1Q8BJ37 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.86■■□□□ 1.25
Tdp1Q8BJ37 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tdp1Q8BJ37 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.85■■□□□ 1.25
Tdp1Q8BJ37 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tdp1Q8BJ37 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.85■■□□□ 1.25
Tdp1Q8BJ37 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Tdp1Q8BJ37 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Tdp1Q8BJ37 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tdp1Q8BJ37 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Tdp1Q8BJ37 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Tdp1Q8BJ37 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Tdp1Q8BJ37 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.83■■□□□ 1.25
Tdp1Q8BJ37 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Tdp1Q8BJ37 Spcs1-204ENSMUST00000226782 949 ntBASIC22.83■■□□□ 1.25
Tdp1Q8BJ37 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Tdp1Q8BJ37 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Tdp1Q8BJ37 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
Tdp1Q8BJ37 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Tdp1Q8BJ37 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tdp1Q8BJ37 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tdp1Q8BJ37 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tdp1Q8BJ37 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tdp1Q8BJ37 Gm5874-201ENSMUST00000096101 508 ntBASIC22.82■■□□□ 1.24
Tdp1Q8BJ37 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tdp1Q8BJ37 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tdp1Q8BJ37 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tdp1Q8BJ37 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Tdp1Q8BJ37 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tdp1Q8BJ37 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Tdp1Q8BJ37 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tdp1Q8BJ37 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Tdp1Q8BJ37 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tdp1Q8BJ37 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.8■■□□□ 1.24
Tdp1Q8BJ37 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.8■■□□□ 1.24
Tdp1Q8BJ37 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tdp1Q8BJ37 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Tdp1Q8BJ37 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.79■■□□□ 1.24
Tdp1Q8BJ37 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Tdp1Q8BJ37 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.79■■□□□ 1.24
Tdp1Q8BJ37 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Tdp1Q8BJ37 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Tdp1Q8BJ37 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Tdp1Q8BJ37 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tdp1Q8BJ37 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tdp1Q8BJ37 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tdp1Q8BJ37 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms