Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.26■■□□□ 1.47
SpidrQ8BGX7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SpidrQ8BGX7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
SpidrQ8BGX7 Spcs1-204ENSMUST00000226782 949 ntBASIC24.26■■□□□ 1.47
SpidrQ8BGX7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SpidrQ8BGX7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SpidrQ8BGX7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SpidrQ8BGX7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SpidrQ8BGX7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SpidrQ8BGX7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SpidrQ8BGX7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.25■■□□□ 1.47
SpidrQ8BGX7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SpidrQ8BGX7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SpidrQ8BGX7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SpidrQ8BGX7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
SpidrQ8BGX7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.24■■□□□ 1.47
SpidrQ8BGX7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.24■■□□□ 1.47
SpidrQ8BGX7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
SpidrQ8BGX7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SpidrQ8BGX7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SpidrQ8BGX7 Gm5874-201ENSMUST00000096101 508 ntBASIC24.23■■□□□ 1.47
SpidrQ8BGX7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SpidrQ8BGX7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SpidrQ8BGX7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SpidrQ8BGX7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SpidrQ8BGX7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SpidrQ8BGX7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SpidrQ8BGX7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SpidrQ8BGX7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
SpidrQ8BGX7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.21■■□□□ 1.47
SpidrQ8BGX7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
SpidrQ8BGX7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SpidrQ8BGX7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
SpidrQ8BGX7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SpidrQ8BGX7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC24.19■■□□□ 1.46
SpidrQ8BGX7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SpidrQ8BGX7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SpidrQ8BGX7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SpidrQ8BGX7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC24.19■■□□□ 1.46
SpidrQ8BGX7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SpidrQ8BGX7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SpidrQ8BGX7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.18■■□□□ 1.46
SpidrQ8BGX7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Gm26833-201ENSMUST00000180899 440 ntBASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SpidrQ8BGX7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SpidrQ8BGX7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SpidrQ8BGX7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SpidrQ8BGX7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.16■■□□□ 1.46
SpidrQ8BGX7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SpidrQ8BGX7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SpidrQ8BGX7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SpidrQ8BGX7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SpidrQ8BGX7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SpidrQ8BGX7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SpidrQ8BGX7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.15■■□□□ 1.46
SpidrQ8BGX7 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.15■■□□□ 1.46
SpidrQ8BGX7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SpidrQ8BGX7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SpidrQ8BGX7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SpidrQ8BGX7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SpidrQ8BGX7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SpidrQ8BGX7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SpidrQ8BGX7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.14■■□□□ 1.45
SpidrQ8BGX7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC24.14■■□□□ 1.45
SpidrQ8BGX7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SpidrQ8BGX7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
SpidrQ8BGX7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SpidrQ8BGX7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms