Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.71■■□□□ 1.07
Trim6Q8BGE7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim6Q8BGE7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim6Q8BGE7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim6Q8BGE7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim6Q8BGE7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim6Q8BGE7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim6Q8BGE7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim6Q8BGE7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim6Q8BGE7 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.7■■□□□ 1.06
Trim6Q8BGE7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Trim6Q8BGE7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim6Q8BGE7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim6Q8BGE7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim6Q8BGE7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim6Q8BGE7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.69■■□□□ 1.06
Trim6Q8BGE7 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.69■■□□□ 1.06
Trim6Q8BGE7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim6Q8BGE7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim6Q8BGE7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim6Q8BGE7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim6Q8BGE7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim6Q8BGE7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim6Q8BGE7 Gm7332-201ENSMUST00000118351 454 ntBASIC21.68■■□□□ 1.06
Trim6Q8BGE7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim6Q8BGE7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim6Q8BGE7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim6Q8BGE7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim6Q8BGE7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim6Q8BGE7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Trim6Q8BGE7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim6Q8BGE7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim6Q8BGE7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Trim6Q8BGE7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim6Q8BGE7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim6Q8BGE7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim6Q8BGE7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim6Q8BGE7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim6Q8BGE7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim6Q8BGE7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim6Q8BGE7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim6Q8BGE7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Trim6Q8BGE7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim6Q8BGE7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim6Q8BGE7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim6Q8BGE7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trim6Q8BGE7 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.63■■□□□ 1.05
Trim6Q8BGE7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim6Q8BGE7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim6Q8BGE7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim6Q8BGE7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim6Q8BGE7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim6Q8BGE7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim6Q8BGE7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim6Q8BGE7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim6Q8BGE7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim6Q8BGE7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms