Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bQ80YF6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bQ80YF6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bQ80YF6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bQ80YF6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bQ80YF6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bQ80YF6 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.33■□□□□ 0.36
Upk3bQ80YF6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bQ80YF6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Upk3bQ80YF6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Upk3bQ80YF6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bQ80YF6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bQ80YF6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bQ80YF6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bQ80YF6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Gm14523-201ENSMUST00000117260 558 ntBASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Gm27502-201ENSMUST00000183495 199 ntBASIC17.32■□□□□ 0.36
Upk3bQ80YF6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bQ80YF6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bQ80YF6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bQ80YF6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bQ80YF6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.31■□□□□ 0.36
Upk3bQ80YF6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bQ80YF6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bQ80YF6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bQ80YF6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bQ80YF6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk3bQ80YF6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Upk3bQ80YF6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Gm7332-201ENSMUST00000118351 454 ntBASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Upk3bQ80YF6 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.27■□□□□ 0.36
Upk3bQ80YF6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Upk3bQ80YF6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk3bQ80YF6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Upk3bQ80YF6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk3bQ80YF6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk3bQ80YF6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Upk3bQ80YF6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.27■□□□□ 0.36
Upk3bQ80YF6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk3bQ80YF6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.27■□□□□ 0.35
Upk3bQ80YF6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upk3bQ80YF6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms