Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim36Q80WG7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim36Q80WG7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim36Q80WG7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Trim36Q80WG7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim36Q80WG7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim36Q80WG7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim36Q80WG7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.7■□□□□ 0.74
Trim36Q80WG7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim36Q80WG7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim36Q80WG7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim36Q80WG7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim36Q80WG7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim36Q80WG7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim36Q80WG7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim36Q80WG7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim36Q80WG7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim36Q80WG7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim36Q80WG7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim36Q80WG7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim36Q80WG7 Rps24-207ENSMUST00000224568 714 ntBASIC19.68■□□□□ 0.74
Trim36Q80WG7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.68■□□□□ 0.74
Trim36Q80WG7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim36Q80WG7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim36Q80WG7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim36Q80WG7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim36Q80WG7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim36Q80WG7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim36Q80WG7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Trim36Q80WG7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim36Q80WG7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.66■□□□□ 0.74
Trim36Q80WG7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim36Q80WG7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.66■□□□□ 0.74
Trim36Q80WG7 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.66■□□□□ 0.74
Trim36Q80WG7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.66■□□□□ 0.74
Trim36Q80WG7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim36Q80WG7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.65■□□□□ 0.74
Trim36Q80WG7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim36Q80WG7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim36Q80WG7 Gm45102-201ENSMUST00000207427 857 ntBASIC19.64■□□□□ 0.73
Trim36Q80WG7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim36Q80WG7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim36Q80WG7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim36Q80WG7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim36Q80WG7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trim36Q80WG7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim36Q80WG7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trim36Q80WG7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim36Q80WG7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim36Q80WG7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim36Q80WG7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim36Q80WG7 Gm14117-201ENSMUST00000122417 843 ntBASIC19.63■□□□□ 0.73
Trim36Q80WG7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim36Q80WG7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim36Q80WG7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim36Q80WG7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim36Q80WG7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.62■□□□□ 0.73
Trim36Q80WG7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim36Q80WG7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.62■□□□□ 0.73
Trim36Q80WG7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim36Q80WG7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim36Q80WG7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms