Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.33■■□□□ 1.01
Trim62Q80V85 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Trim62Q80V85 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.33■■□□□ 1.01
Trim62Q80V85 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
Trim62Q80V85 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim62Q80V85 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
Trim62Q80V85 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.32■■□□□ 1
Trim62Q80V85 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.32■■□□□ 1
Trim62Q80V85 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim62Q80V85 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Trim62Q80V85 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.31■■□□□ 1
Trim62Q80V85 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim62Q80V85 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim62Q80V85 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.3■■□□□ 1
Trim62Q80V85 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trim62Q80V85 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim62Q80V85 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim62Q80V85 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim62Q80V85 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim62Q80V85 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim62Q80V85 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Trim62Q80V85 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Trim62Q80V85 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Trim62Q80V85 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim62Q80V85 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim62Q80V85 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trim62Q80V85 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim62Q80V85 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim62Q80V85 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim62Q80V85 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trim62Q80V85 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim62Q80V85 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.28■■□□□ 1
Trim62Q80V85 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.28■■□□□ 1
Trim62Q80V85 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim62Q80V85 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim62Q80V85 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim62Q80V85 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.27■■□□□ 1
Trim62Q80V85 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim62Q80V85 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim62Q80V85 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.27■■□□□ 1
Trim62Q80V85 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.27■■□□□ 1
Trim62Q80V85 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim62Q80V85 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trim62Q80V85 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim62Q80V85 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trim62Q80V85 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim62Q80V85 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trim62Q80V85 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Trim62Q80V85 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Trim62Q80V85 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim62Q80V85 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Trim62Q80V85 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Trim62Q80V85 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Trim62Q80V85 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim62Q80V85 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim62Q80V85 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim62Q80V85 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim62Q80V85 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim62Q80V85 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trim62Q80V85 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim62Q80V85 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim62Q80V85 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim62Q80V85 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim62Q80V85 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.25■□□□□ 0.99
Trim62Q80V85 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim62Q80V85 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim62Q80V85 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim62Q80V85 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.24■□□□□ 0.99
Trim62Q80V85 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.24■□□□□ 0.99
Trim62Q80V85 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Gm9847-201ENSMUST00000052528 599 ntBASIC21.24■□□□□ 0.99
Trim62Q80V85 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim62Q80V85 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim62Q80V85 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trim62Q80V85 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim62Q80V85 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim62Q80V85 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim62Q80V85 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.23■□□□□ 0.99
Trim62Q80V85 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim62Q80V85 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.23■□□□□ 0.99
Trim62Q80V85 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim62Q80V85 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim62Q80V85 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim62Q80V85 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Trim62Q80V85 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms