Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Gm45102-201ENSMUST00000207427 857 ntBASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpp38Q80UU2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpp38Q80UU2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpp38Q80UU2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Rpp38Q80UU2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpp38Q80UU2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpp38Q80UU2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.62■□□□□ 0.89
Rpp38Q80UU2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpp38Q80UU2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp38Q80UU2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp38Q80UU2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rpp38Q80UU2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp38Q80UU2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp38Q80UU2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp38Q80UU2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rpp38Q80UU2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpp38Q80UU2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpp38Q80UU2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rpp38Q80UU2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rpp38Q80UU2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp38Q80UU2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp38Q80UU2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp38Q80UU2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp38Q80UU2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpp38Q80UU2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Rps24-207ENSMUST00000224568 714 ntBASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp38Q80UU2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp38Q80UU2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp38Q80UU2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp38Q80UU2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp38Q80UU2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rpp38Q80UU2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp38Q80UU2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp38Q80UU2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp38Q80UU2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rpp38Q80UU2 Gm14117-201ENSMUST00000122417 843 ntBASIC20.54■□□□□ 0.88
Rpp38Q80UU2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp38Q80UU2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Rpp38Q80UU2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp38Q80UU2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rpp38Q80UU2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp38Q80UU2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp38Q80UU2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp38Q80UU2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp38Q80UU2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.53■□□□□ 0.88
Rpp38Q80UU2 Gm22238-201ENSMUST00000175222 88 ntBASIC20.53■□□□□ 0.88
Rpp38Q80UU2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.53■□□□□ 0.88
Rpp38Q80UU2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.53■□□□□ 0.88
Rpp38Q80UU2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp38Q80UU2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Rpp38Q80UU2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms