Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh8Q7TSK3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh8Q7TSK3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh8Q7TSK3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh8Q7TSK3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh8Q7TSK3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh8Q7TSK3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.25■□□□□ 0.83
Pcdh8Q7TSK3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh8Q7TSK3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh8Q7TSK3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh8Q7TSK3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdh8Q7TSK3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh8Q7TSK3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh8Q7TSK3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh8Q7TSK3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh8Q7TSK3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Gm45417-201ENSMUST00000209533 758 ntBASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh8Q7TSK3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh8Q7TSK3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh8Q7TSK3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh8Q7TSK3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdh8Q7TSK3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh8Q7TSK3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh8Q7TSK3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh8Q7TSK3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh8Q7TSK3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh8Q7TSK3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh8Q7TSK3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh8Q7TSK3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdh8Q7TSK3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh8Q7TSK3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh8Q7TSK3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Pcdh8Q7TSK3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh8Q7TSK3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Pcdh8Q7TSK3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh8Q7TSK3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh8Q7TSK3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.16■□□□□ 0.82
Pcdh8Q7TSK3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdh8Q7TSK3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdh8Q7TSK3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdh8Q7TSK3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pcdh8Q7TSK3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdh8Q7TSK3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh8Q7TSK3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh8Q7TSK3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh8Q7TSK3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pcdh8Q7TSK3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh8Q7TSK3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh8Q7TSK3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms