Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm5786-201ENSMUST00000085368 882 ntBASIC16.69■□□□□ 0.26
Vma21Q78T54 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vma21Q78T54 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Vma21Q78T54 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vma21Q78T54 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vma21Q78T54 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vma21Q78T54 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vma21Q78T54 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vma21Q78T54 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
Vma21Q78T54 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.68■□□□□ 0.26
Vma21Q78T54 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vma21Q78T54 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.68■□□□□ 0.26
Vma21Q78T54 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Vma21Q78T54 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Vma21Q78T54 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vma21Q78T54 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vma21Q78T54 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vma21Q78T54 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vma21Q78T54 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vma21Q78T54 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.67■□□□□ 0.26
Vma21Q78T54 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vma21Q78T54 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vma21Q78T54 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.67■□□□□ 0.26
Vma21Q78T54 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vma21Q78T54 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vma21Q78T54 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vma21Q78T54 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vma21Q78T54 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vma21Q78T54 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vma21Q78T54 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Vma21Q78T54 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vma21Q78T54 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vma21Q78T54 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vma21Q78T54 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vma21Q78T54 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.66■□□□□ 0.26
Vma21Q78T54 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.66■□□□□ 0.26
Vma21Q78T54 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vma21Q78T54 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.66■□□□□ 0.26
Vma21Q78T54 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vma21Q78T54 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vma21Q78T54 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vma21Q78T54 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vma21Q78T54 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vma21Q78T54 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vma21Q78T54 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vma21Q78T54 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vma21Q78T54 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vma21Q78T54 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vma21Q78T54 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vma21Q78T54 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vma21Q78T54 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vma21Q78T54 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.65■□□□□ 0.26
Vma21Q78T54 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vma21Q78T54 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vma21Q78T54 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vma21Q78T54 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.64■□□□□ 0.25
Vma21Q78T54 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vma21Q78T54 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vma21Q78T54 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vma21Q78T54 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vma21Q78T54 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Vma21Q78T54 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vma21Q78T54 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vma21Q78T54 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vma21Q78T54 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vma21Q78T54 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vma21Q78T54 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vma21Q78T54 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vma21Q78T54 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vma21Q78T54 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vma21Q78T54 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vma21Q78T54 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.62■□□□□ 0.25
Vma21Q78T54 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vma21Q78T54 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vma21Q78T54 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vma21Q78T54 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vma21Q78T54 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Vma21Q78T54 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vma21Q78T54 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vma21Q78T54 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vma21Q78T54 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vma21Q78T54 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.61■□□□□ 0.25
Vma21Q78T54 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.6■□□□□ 0.25
Vma21Q78T54 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.6■□□□□ 0.25
Vma21Q78T54 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.6■□□□□ 0.25
Vma21Q78T54 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms