Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shc4Q6S5L9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.21■□□□□ 0.67
Shc4Q6S5L9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.21■□□□□ 0.67
Shc4Q6S5L9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shc4Q6S5L9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Shc4Q6S5L9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Shc4Q6S5L9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shc4Q6S5L9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shc4Q6S5L9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Shc4Q6S5L9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shc4Q6S5L9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shc4Q6S5L9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.19■□□□□ 0.66
Shc4Q6S5L9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shc4Q6S5L9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Shc4Q6S5L9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.18■□□□□ 0.66
Shc4Q6S5L9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shc4Q6S5L9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shc4Q6S5L9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Shc4Q6S5L9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.17■□□□□ 0.66
Shc4Q6S5L9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shc4Q6S5L9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Shc4Q6S5L9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Shc4Q6S5L9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shc4Q6S5L9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Shc4Q6S5L9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shc4Q6S5L9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shc4Q6S5L9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shc4Q6S5L9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shc4Q6S5L9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Shc4Q6S5L9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Shc4Q6S5L9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shc4Q6S5L9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shc4Q6S5L9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.14■□□□□ 0.65
Shc4Q6S5L9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shc4Q6S5L9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shc4Q6S5L9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shc4Q6S5L9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shc4Q6S5L9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shc4Q6S5L9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shc4Q6S5L9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shc4Q6S5L9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shc4Q6S5L9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.11■□□□□ 0.65
Shc4Q6S5L9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shc4Q6S5L9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shc4Q6S5L9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shc4Q6S5L9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shc4Q6S5L9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shc4Q6S5L9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Shc4Q6S5L9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Shc4Q6S5L9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms