Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad54bQ6PFE3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rad54bQ6PFE3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rad54bQ6PFE3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.7■□□□□ 0.91
Rad54bQ6PFE3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rad54bQ6PFE3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rad54bQ6PFE3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Rad54bQ6PFE3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rad54bQ6PFE3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rad54bQ6PFE3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rad54bQ6PFE3 Gm45444-201ENSMUST00000211394 898 ntBASIC20.67■□□□□ 0.9
Rad54bQ6PFE3 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.67■□□□□ 0.9
Rad54bQ6PFE3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rad54bQ6PFE3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rad54bQ6PFE3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rad54bQ6PFE3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rad54bQ6PFE3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rad54bQ6PFE3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rad54bQ6PFE3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms