Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Chd4Q6PDQ2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Chd4Q6PDQ2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Chd4Q6PDQ2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Chd4Q6PDQ2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Chd4Q6PDQ2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Chd4Q6PDQ2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Chd4Q6PDQ2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Chd4Q6PDQ2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC27.45■■□□□ 1.99
Chd4Q6PDQ2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC27.45■■□□□ 1.99
Chd4Q6PDQ2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC27.45■■□□□ 1.98
Chd4Q6PDQ2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Chd4Q6PDQ2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Chd4Q6PDQ2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Chd4Q6PDQ2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Chd4Q6PDQ2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC27.44■■□□□ 1.98
Chd4Q6PDQ2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Chd4Q6PDQ2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Chd4Q6PDQ2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Chd4Q6PDQ2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Chd4Q6PDQ2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Chd4Q6PDQ2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Chd4Q6PDQ2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Chd4Q6PDQ2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Chd4Q6PDQ2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Chd4Q6PDQ2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Chd4Q6PDQ2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Chd4Q6PDQ2 Gm8493-201ENSMUST00000196881 489 ntBASIC27.4■■□□□ 1.98
Chd4Q6PDQ2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC27.4■■□□□ 1.98
Chd4Q6PDQ2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Chd4Q6PDQ2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Chd4Q6PDQ2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Chd4Q6PDQ2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Chd4Q6PDQ2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Chd4Q6PDQ2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Chd4Q6PDQ2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Chd4Q6PDQ2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Chd4Q6PDQ2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Chd4Q6PDQ2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Chd4Q6PDQ2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC27.38■■□□□ 1.97
Chd4Q6PDQ2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Chd4Q6PDQ2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC27.37■■□□□ 1.97
Chd4Q6PDQ2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Chd4Q6PDQ2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Chd4Q6PDQ2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Chd4Q6PDQ2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC27.37■■□□□ 1.97
Chd4Q6PDQ2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC27.37■■□□□ 1.97
Chd4Q6PDQ2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC27.37■■□□□ 1.97
Chd4Q6PDQ2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC27.37■■□□□ 1.97
Chd4Q6PDQ2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC27.36■■□□□ 1.97
Chd4Q6PDQ2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Chd4Q6PDQ2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Chd4Q6PDQ2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
Chd4Q6PDQ2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 Gm8495-201ENSMUST00000188740 694 ntBASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Chd4Q6PDQ2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC27.34■■□□□ 1.97
Chd4Q6PDQ2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chd4Q6PDQ2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chd4Q6PDQ2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chd4Q6PDQ2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC27.34■■□□□ 1.97
Chd4Q6PDQ2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC27.33■■□□□ 1.97
Chd4Q6PDQ2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Chd4Q6PDQ2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Chd4Q6PDQ2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Chd4Q6PDQ2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Chd4Q6PDQ2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Chd4Q6PDQ2 Gm6085-201ENSMUST00000182774 1470 ntBASIC27.32■■□□□ 1.96
Chd4Q6PDQ2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC27.32■■□□□ 1.96
Chd4Q6PDQ2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Chd4Q6PDQ2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Chd4Q6PDQ2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Chd4Q6PDQ2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC27.31■■□□□ 1.96
Chd4Q6PDQ2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Chd4Q6PDQ2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Chd4Q6PDQ2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 AC164629.5-201ENSMUST00000220387 632 ntBASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 Gm37415-201ENSMUST00000192265 2054 ntBASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC27.3■■□□□ 1.96
Chd4Q6PDQ2 Gm26833-201ENSMUST00000180899 440 ntBASIC27.29■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms