Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.39■■□□□ 1.01
Cep290Q6A078 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.39■■□□□ 1.01
Cep290Q6A078 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cep290Q6A078 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cep290Q6A078 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cep290Q6A078 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cep290Q6A078 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cep290Q6A078 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.38■■□□□ 1.01
Cep290Q6A078 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cep290Q6A078 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cep290Q6A078 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cep290Q6A078 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cep290Q6A078 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cep290Q6A078 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cep290Q6A078 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Cep290Q6A078 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cep290Q6A078 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cep290Q6A078 Gm43530-201ENSMUST00000195920 274 ntBASIC21.36■■□□□ 1.01
Cep290Q6A078 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.36■■□□□ 1.01
Cep290Q6A078 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cep290Q6A078 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cep290Q6A078 Gm27801-201ENSMUST00000184174 223 ntBASIC21.36■■□□□ 1.01
Cep290Q6A078 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.36■■□□□ 1.01
Cep290Q6A078 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cep290Q6A078 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cep290Q6A078 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cep290Q6A078 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cep290Q6A078 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cep290Q6A078 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cep290Q6A078 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cep290Q6A078 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Cep290Q6A078 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cep290Q6A078 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cep290Q6A078 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cep290Q6A078 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.34■■□□□ 1.01
Cep290Q6A078 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cep290Q6A078 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cep290Q6A078 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cep290Q6A078 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cep290Q6A078 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cep290Q6A078 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cep290Q6A078 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.33■■□□□ 1.01
Cep290Q6A078 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cep290Q6A078 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cep290Q6A078 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.33■■□□□ 1
Cep290Q6A078 Gm12441-201ENSMUST00000121806 588 ntBASIC21.33■■□□□ 1
Cep290Q6A078 Gm4968-201ENSMUST00000071458 858 ntBASIC21.33■■□□□ 1
Cep290Q6A078 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.33■■□□□ 1
Cep290Q6A078 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cep290Q6A078 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cep290Q6A078 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cep290Q6A078 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cep290Q6A078 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cep290Q6A078 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cep290Q6A078 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cep290Q6A078 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cep290Q6A078 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Cep290Q6A078 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.31■■□□□ 1
Cep290Q6A078 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cep290Q6A078 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.3■■□□□ 1
Cep290Q6A078 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.3■■□□□ 1
Cep290Q6A078 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cep290Q6A078 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.3■■□□□ 1
Cep290Q6A078 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cep290Q6A078 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cep290Q6A078 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cep290Q6A078 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cep290Q6A078 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.29■■□□□ 1
Cep290Q6A078 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cep290Q6A078 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cep290Q6A078 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Cep290Q6A078 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cep290Q6A078 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.28■■□□□ 1
Cep290Q6A078 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cep290Q6A078 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.27■■□□□ 1
Cep290Q6A078 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Cep290Q6A078 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.27■■□□□ 1
Cep290Q6A078 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cep290Q6A078 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cep290Q6A078 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cep290Q6A078 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cep290Q6A078 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cep290Q6A078 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cep290Q6A078 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cep290Q6A078 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cep290Q6A078 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cep290Q6A078 Gm20760-201ENSMUST00000179197 648 ntBASIC21.26■□□□□ 0.99
Cep290Q6A078 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.26■□□□□ 0.99
Cep290Q6A078 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cep290Q6A078 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cep290Q6A078 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cep290Q6A078 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.26■□□□□ 0.99
Cep290Q6A078 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cep290Q6A078 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cep290Q6A078 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cep290Q6A078 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cep290Q6A078 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.25■□□□□ 0.99
Cep290Q6A078 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cep290Q6A078 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cep290Q6A078 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 205.8 ms