Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AtmQ62388 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AtmQ62388 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
AtmQ62388 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AtmQ62388 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
AtmQ62388 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
AtmQ62388 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AtmQ62388 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AtmQ62388 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.85■□□□□ 0.77
AtmQ62388 Gm40848-201ENSMUST00000221998 324 ntBASIC19.85■□□□□ 0.77
AtmQ62388 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AtmQ62388 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AtmQ62388 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AtmQ62388 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.84■□□□□ 0.77
AtmQ62388 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.84■□□□□ 0.77
AtmQ62388 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
AtmQ62388 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 Mir7071-201ENSMUST00000184847 69 ntBASIC19.84■□□□□ 0.77
AtmQ62388 Gm18671-201ENSMUST00000214826 683 ntBASIC19.84■□□□□ 0.77
AtmQ62388 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AtmQ62388 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AtmQ62388 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.83■□□□□ 0.77
AtmQ62388 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.83■□□□□ 0.77
AtmQ62388 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.83■□□□□ 0.77
AtmQ62388 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.83■□□□□ 0.77
AtmQ62388 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
AtmQ62388 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AtmQ62388 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.83■□□□□ 0.76
AtmQ62388 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
AtmQ62388 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.82■□□□□ 0.76
AtmQ62388 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.82■□□□□ 0.76
AtmQ62388 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AtmQ62388 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.82■□□□□ 0.76
AtmQ62388 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
AtmQ62388 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
AtmQ62388 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AtmQ62388 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.82■□□□□ 0.76
AtmQ62388 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.82■□□□□ 0.76
AtmQ62388 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AtmQ62388 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AtmQ62388 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.81■□□□□ 0.76
AtmQ62388 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AtmQ62388 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
AtmQ62388 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
AtmQ62388 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AtmQ62388 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AtmQ62388 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AtmQ62388 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AtmQ62388 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AtmQ62388 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AtmQ62388 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.79■□□□□ 0.76
AtmQ62388 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AtmQ62388 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AtmQ62388 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
AtmQ62388 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AtmQ62388 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AtmQ62388 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.79■□□□□ 0.76
AtmQ62388 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
AtmQ62388 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AtmQ62388 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AtmQ62388 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AtmQ62388 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AtmQ62388 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AtmQ62388 Gm10653-202ENSMUST00000139570 835 ntBASIC19.78■□□□□ 0.76
AtmQ62388 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AtmQ62388 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AtmQ62388 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AtmQ62388 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AtmQ62388 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AtmQ62388 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AtmQ62388 Gm27801-201ENSMUST00000184174 223 ntBASIC19.77■□□□□ 0.76
AtmQ62388 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AtmQ62388 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AtmQ62388 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.77■□□□□ 0.76
AtmQ62388 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.77■□□□□ 0.75
AtmQ62388 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AtmQ62388 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AtmQ62388 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.76■□□□□ 0.75
AtmQ62388 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AtmQ62388 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
AtmQ62388 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AtmQ62388 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.76■□□□□ 0.75
AtmQ62388 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.76■□□□□ 0.75
AtmQ62388 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.76■□□□□ 0.75
AtmQ62388 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AtmQ62388 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.75■□□□□ 0.75
AtmQ62388 Gm7977-201ENSMUST00000193787 748 ntBASIC19.75■□□□□ 0.75
AtmQ62388 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AtmQ62388 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AtmQ62388 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AtmQ62388 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AtmQ62388 Gm12933-201ENSMUST00000120203 872 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms