Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Scn9aQ62205 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scn9aQ62205 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scn9aQ62205 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.84■■□□□ 1.57
Scn9aQ62205 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Scn9aQ62205 Gm10033-202ENSMUST00000211874 928 ntBASIC24.84■■□□□ 1.57
Scn9aQ62205 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.84■■□□□ 1.57
Scn9aQ62205 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Scn9aQ62205 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Scn9aQ62205 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Scn9aQ62205 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.83■■□□□ 1.57
Scn9aQ62205 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
Scn9aQ62205 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Scn9aQ62205 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC24.82■■□□□ 1.56
Scn9aQ62205 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Scn9aQ62205 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Scn9aQ62205 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Scn9aQ62205 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.82■■□□□ 1.56
Scn9aQ62205 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
Scn9aQ62205 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scn9aQ62205 Gm40848-201ENSMUST00000221998 324 ntBASIC24.81■■□□□ 1.56
Scn9aQ62205 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn9aQ62205 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn9aQ62205 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn9aQ62205 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Scn9aQ62205 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Scn9aQ62205 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scn9aQ62205 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.79■■□□□ 1.56
Scn9aQ62205 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC24.79■■□□□ 1.56
Scn9aQ62205 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Scn9aQ62205 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Scn9aQ62205 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.78■■□□□ 1.56
Scn9aQ62205 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Scn9aQ62205 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Scn9aQ62205 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scn9aQ62205 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Scn9aQ62205 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.77■■□□□ 1.56
Scn9aQ62205 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Scn9aQ62205 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC24.77■■□□□ 1.56
Scn9aQ62205 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scn9aQ62205 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scn9aQ62205 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scn9aQ62205 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.76■■□□□ 1.55
Scn9aQ62205 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scn9aQ62205 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scn9aQ62205 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scn9aQ62205 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.75■■□□□ 1.55
Scn9aQ62205 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Scn9aQ62205 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scn9aQ62205 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scn9aQ62205 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.75■■□□□ 1.55
Scn9aQ62205 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.74■■□□□ 1.55
Scn9aQ62205 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scn9aQ62205 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scn9aQ62205 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC24.74■■□□□ 1.55
Scn9aQ62205 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Scn9aQ62205 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.74■■□□□ 1.55
Scn9aQ62205 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scn9aQ62205 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scn9aQ62205 Gm43530-201ENSMUST00000195920 274 ntBASIC24.73■■□□□ 1.55
Scn9aQ62205 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.73■■□□□ 1.55
Scn9aQ62205 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Scn9aQ62205 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Scn9aQ62205 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scn9aQ62205 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scn9aQ62205 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.72■■□□□ 1.55
Scn9aQ62205 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Scn9aQ62205 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Scn9aQ62205 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scn9aQ62205 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Scn9aQ62205 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.71■■□□□ 1.55
Scn9aQ62205 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scn9aQ62205 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scn9aQ62205 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scn9aQ62205 Gm12669-201ENSMUST00000122162 1009 ntBASIC24.71■■□□□ 1.55
Scn9aQ62205 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scn9aQ62205 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Scn9aQ62205 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
Scn9aQ62205 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Scn9aQ62205 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Scn9aQ62205 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Scn9aQ62205 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Scn9aQ62205 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Scn9aQ62205 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.7■■□□□ 1.54
Scn9aQ62205 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Scn9aQ62205 Smad6-203ENSMUST00000179458 273 ntBASIC24.69■■□□□ 1.54
Scn9aQ62205 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scn9aQ62205 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.69■■□□□ 1.54
Scn9aQ62205 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.69■■□□□ 1.54
Scn9aQ62205 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.68■■□□□ 1.54
Scn9aQ62205 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scn9aQ62205 AV356131-201ENSMUST00000206201 750 ntBASIC24.68■■□□□ 1.54
Scn9aQ62205 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Scn9aQ62205 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scn9aQ62205 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC24.67■■□□□ 1.54
Scn9aQ62205 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Scn9aQ62205 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scn9aQ62205 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scn9aQ62205 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.66■■□□□ 1.54
Scn9aQ62205 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms