Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd53Q61451 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd53Q61451 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd53Q61451 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Cd53Q61451 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.85■□□□□ 0.61
Cd53Q61451 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cd53Q61451 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd53Q61451 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.85■□□□□ 0.61
Cd53Q61451 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cd53Q61451 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd53Q61451 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd53Q61451 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.84■□□□□ 0.61
Cd53Q61451 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd53Q61451 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.84■□□□□ 0.61
Cd53Q61451 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd53Q61451 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cd53Q61451 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cd53Q61451 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd53Q61451 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd53Q61451 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cd53Q61451 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd53Q61451 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd53Q61451 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.83■□□□□ 0.61
Cd53Q61451 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd53Q61451 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd53Q61451 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd53Q61451 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cd53Q61451 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd53Q61451 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd53Q61451 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd53Q61451 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cd53Q61451 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd53Q61451 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd53Q61451 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cd53Q61451 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cd53Q61451 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd53Q61451 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd53Q61451 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.82■□□□□ 0.6
Cd53Q61451 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd53Q61451 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.82■□□□□ 0.6
Cd53Q61451 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.82■□□□□ 0.6
Cd53Q61451 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cd53Q61451 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd53Q61451 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd53Q61451 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.82■□□□□ 0.6
Cd53Q61451 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd53Q61451 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cd53Q61451 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd53Q61451 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd53Q61451 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd53Q61451 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd53Q61451 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd53Q61451 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cd53Q61451 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd53Q61451 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cd53Q61451 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd53Q61451 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd53Q61451 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd53Q61451 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd53Q61451 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd53Q61451 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd53Q61451 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd53Q61451 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd53Q61451 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd53Q61451 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd53Q61451 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd53Q61451 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cd53Q61451 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cd53Q61451 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd53Q61451 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.79■□□□□ 0.6
Cd53Q61451 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd53Q61451 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd53Q61451 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd53Q61451 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd53Q61451 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cd53Q61451 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.78■□□□□ 0.6
Cd53Q61451 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Cd53Q61451 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd53Q61451 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cd53Q61451 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.78■□□□□ 0.6
Cd53Q61451 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cd53Q61451 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd53Q61451 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd53Q61451 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd53Q61451 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd53Q61451 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd53Q61451 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.77■□□□□ 0.6
Cd53Q61451 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.77■□□□□ 0.6
Cd53Q61451 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.77■□□□□ 0.6
Cd53Q61451 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms