Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1eQ61290 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1eQ61290 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1eQ61290 Gm10493-201ENSMUST00000097270 612 ntBASIC20.48■□□□□ 0.87
Cacna1eQ61290 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.48■□□□□ 0.87
Cacna1eQ61290 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cacna1eQ61290 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1eQ61290 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1eQ61290 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1eQ61290 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.48■□□□□ 0.87
Cacna1eQ61290 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.47■□□□□ 0.87
Cacna1eQ61290 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cacna1eQ61290 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Gm26833-201ENSMUST00000180899 440 ntBASIC20.47■□□□□ 0.87
Cacna1eQ61290 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.47■□□□□ 0.87
Cacna1eQ61290 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cacna1eQ61290 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1eQ61290 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1eQ61290 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1eQ61290 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cacna1eQ61290 Gm10849-201ENSMUST00000100397 618 ntBASIC20.44■□□□□ 0.86
Cacna1eQ61290 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1eQ61290 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.44■□□□□ 0.86
Cacna1eQ61290 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cacna1eQ61290 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1eQ61290 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1eQ61290 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1eQ61290 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1eQ61290 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cacna1eQ61290 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1eQ61290 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Cacna1eQ61290 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1eQ61290 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.43■□□□□ 0.86
Cacna1eQ61290 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1eQ61290 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.43■□□□□ 0.86
Cacna1eQ61290 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1eQ61290 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1eQ61290 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.43■□□□□ 0.86
Cacna1eQ61290 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Cacna1eQ61290 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1eQ61290 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1eQ61290 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1eQ61290 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cacna1eQ61290 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1eQ61290 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Cacna1eQ61290 Gm29257-201ENSMUST00000186115 639 ntBASIC20.42■□□□□ 0.86
Cacna1eQ61290 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1eQ61290 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1eQ61290 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1eQ61290 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.41■□□□□ 0.86
Cacna1eQ61290 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1eQ61290 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1eQ61290 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.4■□□□□ 0.86
Cacna1eQ61290 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1eQ61290 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1eQ61290 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.4■□□□□ 0.86
Cacna1eQ61290 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1eQ61290 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cacna1eQ61290 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.4■□□□□ 0.86
Cacna1eQ61290 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.4■□□□□ 0.86
Cacna1eQ61290 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.4■□□□□ 0.86
Cacna1eQ61290 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1eQ61290 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.39■□□□□ 0.86
Cacna1eQ61290 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacna1eQ61290 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1eQ61290 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1eQ61290 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.39■□□□□ 0.85
Cacna1eQ61290 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1eQ61290 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cacna1eQ61290 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1eQ61290 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1eQ61290 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.39■□□□□ 0.85
Cacna1eQ61290 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1eQ61290 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1eQ61290 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1eQ61290 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1eQ61290 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1eQ61290 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1eQ61290 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.38■□□□□ 0.85
Cacna1eQ61290 Smad6-203ENSMUST00000179458 273 ntBASIC20.38■□□□□ 0.85
Cacna1eQ61290 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms