Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdf4Q61112 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdf4Q61112 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdf4Q61112 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.87■□□□□ 0.93
Sdf4Q61112 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdf4Q61112 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Sdf4Q61112 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.86■□□□□ 0.93
Sdf4Q61112 Gm7417-201ENSMUST00000192950 473 ntBASIC20.86■□□□□ 0.93
Sdf4Q61112 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdf4Q61112 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.86■□□□□ 0.93
Sdf4Q61112 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.86■□□□□ 0.93
Sdf4Q61112 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdf4Q61112 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdf4Q61112 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdf4Q61112 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Sdf4Q61112 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.85■□□□□ 0.93
Sdf4Q61112 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.85■□□□□ 0.93
Sdf4Q61112 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdf4Q61112 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.85■□□□□ 0.93
Sdf4Q61112 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.85■□□□□ 0.93
Sdf4Q61112 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sdf4Q61112 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdf4Q61112 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdf4Q61112 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.84■□□□□ 0.93
Sdf4Q61112 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.84■□□□□ 0.93
Sdf4Q61112 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdf4Q61112 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdf4Q61112 Etf1-202ENSMUST00000180351 108 ntBASIC20.84■□□□□ 0.93
Sdf4Q61112 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.84■□□□□ 0.93
Sdf4Q61112 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdf4Q61112 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdf4Q61112 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.83■□□□□ 0.93
Sdf4Q61112 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Sdf4Q61112 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Sdf4Q61112 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sdf4Q61112 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sdf4Q61112 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.82■□□□□ 0.92
Sdf4Q61112 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdf4Q61112 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.82■□□□□ 0.92
Sdf4Q61112 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sdf4Q61112 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sdf4Q61112 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdf4Q61112 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdf4Q61112 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sdf4Q61112 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sdf4Q61112 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdf4Q61112 Gm9959-201ENSMUST00000068277 390 ntBASIC20.81■□□□□ 0.92
Sdf4Q61112 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdf4Q61112 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sdf4Q61112 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdf4Q61112 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.8■□□□□ 0.92
Sdf4Q61112 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdf4Q61112 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdf4Q61112 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdf4Q61112 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdf4Q61112 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sdf4Q61112 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sdf4Q61112 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdf4Q61112 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sdf4Q61112 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sdf4Q61112 Rps24-207ENSMUST00000224568 714 ntBASIC20.79■□□□□ 0.92
Sdf4Q61112 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sdf4Q61112 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdf4Q61112 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Sdf4Q61112 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sdf4Q61112 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdf4Q61112 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.78■□□□□ 0.92
Sdf4Q61112 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.78■□□□□ 0.92
Sdf4Q61112 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdf4Q61112 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Sdf4Q61112 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdf4Q61112 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Sdf4Q61112 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.77■□□□□ 0.92
Sdf4Q61112 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdf4Q61112 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdf4Q61112 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdf4Q61112 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdf4Q61112 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Sdf4Q61112 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
Sdf4Q61112 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdf4Q61112 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sdf4Q61112 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sdf4Q61112 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdf4Q61112 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sdf4Q61112 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.77■□□□□ 0.92
Sdf4Q61112 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sdf4Q61112 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Sdf4Q61112 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Sdf4Q61112 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sdf4Q61112 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdf4Q61112 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Sdf4Q61112 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sdf4Q61112 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.75■□□□□ 0.91
Sdf4Q61112 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdf4Q61112 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdf4Q61112 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdf4Q61112 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdf4Q61112 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdf4Q61112 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdf4Q61112 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms