Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col12a1Q60847 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col12a1Q60847 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.85■□□□□ 0.93
Col12a1Q60847 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col12a1Q60847 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col12a1Q60847 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col12a1Q60847 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col12a1Q60847 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col12a1Q60847 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col12a1Q60847 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col12a1Q60847 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.83■□□□□ 0.93
Col12a1Q60847 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Col12a1Q60847 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Col12a1Q60847 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.83■□□□□ 0.92
Col12a1Q60847 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Col12a1Q60847 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col12a1Q60847 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col12a1Q60847 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col12a1Q60847 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col12a1Q60847 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col12a1Q60847 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col12a1Q60847 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col12a1Q60847 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col12a1Q60847 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.82■□□□□ 0.92
Col12a1Q60847 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col12a1Q60847 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col12a1Q60847 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col12a1Q60847 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col12a1Q60847 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col12a1Q60847 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.8■□□□□ 0.92
Col12a1Q60847 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.8■□□□□ 0.92
Col12a1Q60847 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col12a1Q60847 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col12a1Q60847 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Col12a1Q60847 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col12a1Q60847 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col12a1Q60847 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.79■□□□□ 0.92
Col12a1Q60847 Gm12527-201ENSMUST00000117967 564 ntBASIC20.79■□□□□ 0.92
Col12a1Q60847 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.79■□□□□ 0.92
Col12a1Q60847 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.79■□□□□ 0.92
Col12a1Q60847 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col12a1Q60847 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col12a1Q60847 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.78■□□□□ 0.92
Col12a1Q60847 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col12a1Q60847 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col12a1Q60847 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Col12a1Q60847 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col12a1Q60847 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col12a1Q60847 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col12a1Q60847 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col12a1Q60847 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col12a1Q60847 Smad6-203ENSMUST00000179458 273 ntBASIC20.77■□□□□ 0.92
Col12a1Q60847 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.77■□□□□ 0.92
Col12a1Q60847 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col12a1Q60847 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.77■□□□□ 0.92
Col12a1Q60847 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col12a1Q60847 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Col12a1Q60847 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col12a1Q60847 Gm7977-201ENSMUST00000193787 748 ntBASIC20.76■□□□□ 0.91
Col12a1Q60847 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.76■□□□□ 0.91
Col12a1Q60847 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.76■□□□□ 0.91
Col12a1Q60847 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.76■□□□□ 0.91
Col12a1Q60847 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Col12a1Q60847 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col12a1Q60847 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col12a1Q60847 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col12a1Q60847 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.75■□□□□ 0.91
Col12a1Q60847 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col12a1Q60847 Gm42778-201ENSMUST00000199644 553 ntBASIC20.74■□□□□ 0.91
Col12a1Q60847 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col12a1Q60847 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col12a1Q60847 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.74■□□□□ 0.91
Col12a1Q60847 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col12a1Q60847 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col12a1Q60847 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col12a1Q60847 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col12a1Q60847 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col12a1Q60847 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col12a1Q60847 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col12a1Q60847 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.73■□□□□ 0.91
Col12a1Q60847 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col12a1Q60847 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col12a1Q60847 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col12a1Q60847 Gm27801-201ENSMUST00000184174 223 ntBASIC20.72■□□□□ 0.91
Col12a1Q60847 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col12a1Q60847 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col12a1Q60847 Gm22240-201ENSMUST00000175225 82 ntBASIC20.72■□□□□ 0.91
Col12a1Q60847 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col12a1Q60847 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col12a1Q60847 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col12a1Q60847 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Col12a1Q60847 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col12a1Q60847 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col12a1Q60847 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col12a1Q60847 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col12a1Q60847 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col12a1Q60847 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Col12a1Q60847 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col12a1Q60847 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col12a1Q60847 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms