Protein–RNA interactions for Protein: Q60793

Klf4, Krueppel-like factor 4, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf4Q60793 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Klf4Q60793 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Klf4Q60793 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Klf4Q60793 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Klf4Q60793 Gm43566-201ENSMUST00000196851 808 ntBASIC19.48■□□□□ 0.71
Klf4Q60793 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Klf4Q60793 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Klf4Q60793 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Klf4Q60793 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Klf4Q60793 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.47■□□□□ 0.71
Klf4Q60793 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Klf4Q60793 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Klf4Q60793 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Klf4Q60793 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Klf4Q60793 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Klf4Q60793 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Klf4Q60793 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Klf4Q60793 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Klf4Q60793 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Klf4Q60793 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Klf4Q60793 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Klf4Q60793 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Klf4Q60793 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Klf4Q60793 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.46■□□□□ 0.71
Klf4Q60793 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Klf4Q60793 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Klf4Q60793 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Klf4Q60793 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Klf4Q60793 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.44■□□□□ 0.7
Klf4Q60793 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Klf4Q60793 Gm13238-201ENSMUST00000117655 780 ntBASIC19.44■□□□□ 0.7
Klf4Q60793 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.44■□□□□ 0.7
Klf4Q60793 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.44■□□□□ 0.7
Klf4Q60793 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.44■□□□□ 0.7
Klf4Q60793 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.44■□□□□ 0.7
Klf4Q60793 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Klf4Q60793 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Klf4Q60793 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Klf4Q60793 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Klf4Q60793 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Klf4Q60793 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.43■□□□□ 0.7
Klf4Q60793 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.43■□□□□ 0.7
Klf4Q60793 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Klf4Q60793 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
Klf4Q60793 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.42■□□□□ 0.7
Klf4Q60793 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.42■□□□□ 0.7
Klf4Q60793 Gm5921-201ENSMUST00000075898 882 ntBASIC19.42■□□□□ 0.7
Klf4Q60793 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Klf4Q60793 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Klf4Q60793 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Klf4Q60793 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Klf4Q60793 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.41■□□□□ 0.7
Klf4Q60793 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.41■□□□□ 0.7
Klf4Q60793 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Klf4Q60793 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Klf4Q60793 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.41■□□□□ 0.7
Klf4Q60793 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Klf4Q60793 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Klf4Q60793 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Klf4Q60793 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Gm10399-202ENSMUST00000202768 748 ntBASIC19.4■□□□□ 0.7
Klf4Q60793 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Klf4Q60793 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
Klf4Q60793 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.39■□□□□ 0.7
Klf4Q60793 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Klf4Q60793 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Klf4Q60793 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Klf4Q60793 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Klf4Q60793 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Klf4Q60793 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Klf4Q60793 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Klf4Q60793 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms