Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav8d-1Q5R1H8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-1Q5R1H8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-1Q5R1H8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-1Q5R1H8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-1Q5R1H8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.71■□□□□ 0.27
Trav8d-1Q5R1H8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trav8d-1Q5R1H8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8d-1Q5R1H8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8d-1Q5R1H8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav8d-1Q5R1H8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trav8d-1Q5R1H8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav8d-1Q5R1H8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav8d-1Q5R1H8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8d-1Q5R1H8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav8d-1Q5R1H8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-1Q5R1H8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav8d-1Q5R1H8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-1Q5R1H8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav8d-1Q5R1H8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-1Q5R1H8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-1Q5R1H8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-1Q5R1H8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-1Q5R1H8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-1Q5R1H8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav8d-1Q5R1H8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-1Q5R1H8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-1Q5R1H8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav8d-1Q5R1H8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav8d-1Q5R1H8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-1Q5R1H8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-1Q5R1H8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.61■□□□□ 0.25
Trav8d-1Q5R1H8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms