Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 Gm10232-201ENSMUST00000089221 720 ntBASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav5d-4Q5R1F6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav5d-4Q5R1F6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.62■□□□□ 0.41
Trav5d-4Q5R1F6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5d-4Q5R1F6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5d-4Q5R1F6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5d-4Q5R1F6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5d-4Q5R1F6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5d-4Q5R1F6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5d-4Q5R1F6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5d-4Q5R1F6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav5d-4Q5R1F6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.58■□□□□ 0.4
Trav5d-4Q5R1F6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5d-4Q5R1F6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5d-4Q5R1F6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5d-4Q5R1F6 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.58■□□□□ 0.4
Trav5d-4Q5R1F6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5d-4Q5R1F6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.58■□□□□ 0.4
Trav5d-4Q5R1F6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav5d-4Q5R1F6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Gm10399-202ENSMUST00000202768 748 ntBASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5d-4Q5R1F6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms