Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav8d-2Q5R1B6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav8d-2Q5R1B6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav8d-2Q5R1B6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav8d-2Q5R1B6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav8d-2Q5R1B6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trav8d-2Q5R1B6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.26■□□□□ 0.83
Trav8d-2Q5R1B6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.26■□□□□ 0.83
Trav8d-2Q5R1B6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Gm27011-201ENSMUST00000182352 972 ntBASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav8d-2Q5R1B6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav8d-2Q5R1B6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Trav8d-2Q5R1B6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav8d-2Q5R1B6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav8d-2Q5R1B6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav8d-2Q5R1B6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav8d-2Q5R1B6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.24■□□□□ 0.83
Trav8d-2Q5R1B6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.23■□□□□ 0.83
Trav8d-2Q5R1B6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav8d-2Q5R1B6 AV356131-201ENSMUST00000206201 750 ntBASIC20.23■□□□□ 0.83
Trav8d-2Q5R1B6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav8d-2Q5R1B6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav8d-2Q5R1B6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav8d-2Q5R1B6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav8d-2Q5R1B6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav8d-2Q5R1B6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav8d-2Q5R1B6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav8d-2Q5R1B6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav8d-2Q5R1B6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav8d-2Q5R1B6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav8d-2Q5R1B6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.21■□□□□ 0.83
Trav8d-2Q5R1B6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav8d-2Q5R1B6 Gm42778-201ENSMUST00000199644 553 ntBASIC20.21■□□□□ 0.83
Trav8d-2Q5R1B6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
Trav8d-2Q5R1B6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav8d-2Q5R1B6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav8d-2Q5R1B6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trav8d-2Q5R1B6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.2■□□□□ 0.82
Trav8d-2Q5R1B6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trav8d-2Q5R1B6 Gm10033-202ENSMUST00000211874 928 ntBASIC20.2■□□□□ 0.82
Trav8d-2Q5R1B6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav8d-2Q5R1B6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav8d-2Q5R1B6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav8d-2Q5R1B6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Trav8d-2Q5R1B6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav8d-2Q5R1B6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav8d-2Q5R1B6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trav8d-2Q5R1B6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav8d-2Q5R1B6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav8d-2Q5R1B6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav8d-2Q5R1B6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav8d-2Q5R1B6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav8d-2Q5R1B6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav8d-2Q5R1B6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms