Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rnf20Q5DTM8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Rnf20Q5DTM8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf20Q5DTM8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Gm15820-201ENSMUST00000201566 728 ntBASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Gm40881-201ENSMUST00000223397 166 ntBASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Rnf20Q5DTM8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf20Q5DTM8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf20Q5DTM8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf20Q5DTM8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf20Q5DTM8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Rnf20Q5DTM8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.45■■□□□ 1.5
Rnf20Q5DTM8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Rnf20Q5DTM8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf20Q5DTM8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf20Q5DTM8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.45■■□□□ 1.5
Rnf20Q5DTM8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Rnf20Q5DTM8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf20Q5DTM8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Rnf20Q5DTM8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Rnf20Q5DTM8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.43■■□□□ 1.5
Rnf20Q5DTM8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf20Q5DTM8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf20Q5DTM8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf20Q5DTM8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf20Q5DTM8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf20Q5DTM8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf20Q5DTM8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf20Q5DTM8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf20Q5DTM8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf20Q5DTM8 Gm15546-201ENSMUST00000122095 826 ntBASIC24.41■■□□□ 1.5
Rnf20Q5DTM8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Rnf20Q5DTM8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf20Q5DTM8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Rnf20Q5DTM8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf20Q5DTM8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf20Q5DTM8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.4■■□□□ 1.5
Rnf20Q5DTM8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf20Q5DTM8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf20Q5DTM8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf20Q5DTM8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf20Q5DTM8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rnf20Q5DTM8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rnf20Q5DTM8 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.39■■□□□ 1.49
Rnf20Q5DTM8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rnf20Q5DTM8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.39■■□□□ 1.49
Rnf20Q5DTM8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rnf20Q5DTM8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rnf20Q5DTM8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rnf20Q5DTM8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf20Q5DTM8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
Rnf20Q5DTM8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf20Q5DTM8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.38■■□□□ 1.49
Rnf20Q5DTM8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf20Q5DTM8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf20Q5DTM8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf20Q5DTM8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf20Q5DTM8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf20Q5DTM8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf20Q5DTM8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.36■■□□□ 1.49
Rnf20Q5DTM8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms